Transposon Tn5 excision in yeast

Influence of DNA polymerases α, δ, and ε and repair genes

D. A. Gordenin, A. L. Malkova, A. Peterzen, V. N. Kulikov, Youri I Pavlov, E. Perkins, M. A. Resnick

Research output: Contribution to journalArticle

76 Citations (Scopus)

Abstract

Interaction between short repeats may be a source of genomic rearrangements and deletions. We investigated possible interactions between short (9 base pairs) direct repeats in yeast by using our previously described system for analyzing bacterial transposon Tn5 excision in yeast. Mutations of either POL3 or POL1, the proposed structural genes for polymerases δ and α, respectively, yield high levels of excision at semipermissive temperatures. pol2 (corresponding to polymerase ε) and pol2 pol3 double mutants do not exhibit enhanced excision. A majority of excision events involve direct repeats and are precise; the remaining imprecise excisions occur within or in the vicinity of the repeats. The three DNA repair pathways identified by rad1, rad6 and rad18, rad50 and rad52 mutations were examined for their possible role in Tn5 excision; no enhancement was observed in mutants. However, the pol3-stimulated Tn5 excision was reduced in rad52 and rad50 mutants. This suggests the potential for interaction between the systems for DNA double-strand break/recombinational repair and DNA synthesis. Based on the suggestion of Morrison et al. [Morrison, A., Araki, H., Clark, A. B., Hamatake, R. H. & Sugino, A. (1990) Cell 62, 1143-1151] that polymerases δ and α are responsible for lagging-strand synthesis and that polymerase ε is responsible for leading-strand synthesis, we suggest that Tn5 excision is stimulated under conditions of altered lagging-strand synthesis, possibly due to extended opportunities for single-strand interactions between the inverted insertion sequence I550 repeats of Tn5.

Original languageEnglish (US)
Pages (from-to)3785-3789
Number of pages5
JournalProceedings of the National Academy of Sciences of the United States of America
Volume89
Issue number9
DOIs
StatePublished - Jan 1 1992

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Nucleic Acid Repetitive Sequences
DNA-Directed DNA Polymerase
DNA Repair
Yeasts
Sequence Inversion
Recombinational DNA Repair
Mutation
Double-Stranded DNA Breaks
Base Pairing
Genes
Temperature

Keywords

  • DNA repair
  • Rad50, -52
  • Recombination

ASJC Scopus subject areas

  • General

Cite this

Transposon Tn5 excision in yeast : Influence of DNA polymerases α, δ, and ε and repair genes. / Gordenin, D. A.; Malkova, A. L.; Peterzen, A.; Kulikov, V. N.; Pavlov, Youri I; Perkins, E.; Resnick, M. A.

In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 89, No. 9, 01.01.1992, p. 3785-3789.

Research output: Contribution to journalArticle

Gordenin, D. A. ; Malkova, A. L. ; Peterzen, A. ; Kulikov, V. N. ; Pavlov, Youri I ; Perkins, E. ; Resnick, M. A. / Transposon Tn5 excision in yeast : Influence of DNA polymerases α, δ, and ε and repair genes. In: Proceedings of the National Academy of Sciences of the United States of America. 1992 ; Vol. 89, No. 9. pp. 3785-3789.
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