Thermostabilization of a chimeric enzyme by residue substitutions: Four amino acid residues in loop regions are responsible for the thermostability of Thermus thermophilus isopropylmalate dehydrogenase

Koichi Numata, Yoko Hayashi-Iwasaki, Jitsutaro Kawaguchi, Masahiro Sakurai, Hideaki Moriyama, Nobuo Tanaka, Tairo Oshima

Research output: Contribution to journalArticle

18 Citations (Scopus)

Abstract

A chimeric 3-isopropylmalate dehydrogenase, named 2T2M6T, made of parts from an extreme thermophile, Thermus thermophilus, and a mesophile, Bacillus subtilis, was found to be considerably more labile than the T. thermophilus wild-type isopropylmalate dehydrogenase. In order to identify the molecular basis of the thermal stability of the T. thermophilus isopropylmalate dehydrogenase, 11 amino acid residues in the mesophilic portion of the chimera were substituted by the corresponding residues of the T. thermophilus enzyme, and the effects of the side chain substitutions were analyzed by comparing the reaction rate of irreversible heat denaturation and catalytic parameters of the mutant chimeras with those of the original chimera, 2T2M6T. Four single-site mutants were successfully stabilized without any loss of the catalytic function. All these four sites are located in loop regions of the enzyme. Our results strongly suggest the importance of these loop structures to the extreme stability of the T. thermophilus isopropylmalate dehydrogenase.

Original languageEnglish (US)
Pages (from-to)174-183
Number of pages10
JournalBiochimica et Biophysica Acta - Protein Structure and Molecular Enzymology
Volume1545
Issue number1-2
DOIs
StatePublished - Feb 9 2001

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Thermus thermophilus
Amino Acid Substitution
Oxidoreductases
Substitution reactions
Amino Acids
3-Isopropylmalate Dehydrogenase
Enzymes
Denaturation
Bacilli
Hot Temperature
Reaction rates
Thermodynamic stability
Bacillus subtilis

Keywords

  • 3-Isopropylmalate dehydrogenase
  • Chimera
  • Protein stability
  • Site-directed mutagenesis
  • Thermus thermophilus

ASJC Scopus subject areas

  • Biophysics
  • Structural Biology
  • Biochemistry
  • Molecular Biology

Cite this

Thermostabilization of a chimeric enzyme by residue substitutions : Four amino acid residues in loop regions are responsible for the thermostability of Thermus thermophilus isopropylmalate dehydrogenase. / Numata, Koichi; Hayashi-Iwasaki, Yoko; Kawaguchi, Jitsutaro; Sakurai, Masahiro; Moriyama, Hideaki; Tanaka, Nobuo; Oshima, Tairo.

In: Biochimica et Biophysica Acta - Protein Structure and Molecular Enzymology, Vol. 1545, No. 1-2, 09.02.2001, p. 174-183.

Research output: Contribution to journalArticle

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