Repeated evolution of chimeric fusion genes in the β-globin gene family of laurasiatherian mammals

Michael J. Gaudry, Jay F. Storz, Gary Tyler Butts, Kevin L. Campbell, Federico G. Hoffmann

Research output: Contribution to journalArticle

17 Citations (Scopus)

Abstract

The evolutionaryfate of chimeric fusion genes may be strongly influenced by their recombinational mode of origin and the nature of functional divergence between the parental genes. In the 3-globin gene family of placental mammals, the two postnatally expressed - and j3-globin genes (HBD and HBB, respectively) have a propensity for recombinational exchange via gene conversion and unequal crossing-over. In the latter case, there are good reasons to expect differences in retention rates for the reciprocal HBBIHBD and HBDI HBB fusion genes due to thalassemia pathologies associated with the HBDIHBB Lepore" deletion mutant in humans. Here, we report a comparative genomic analysis of the mammalian β-globin gene cluster, which revealed that chimeric HBBIHBD fusion genes originated independently in four separate lineages of laurasiatherian mammals: Eulipotyphlans (shrews, moles, and hedgehogs), carnivores, microchiropteran bats, and cetaceans. In cases where an independently derived "anti-Lepore" duplication mutant has become fixed, the parental HBD and/or HBB genes have typically been inactivated or deleted, so that the newly created HBB/HBD fusion gene is primarily responsible for synthesizing the β-type subunits of adult and fetal hemoglobin (Hb). Contraryto conventional wisdom that the HBD gene is a vestigial relict that is typically inactivated or expressed at negligible levels, we show that HBD-like genes often encode a substantial fraction (20-100%) of β-chain Hbs in laurasiatherian taxa. Our results indicate that the ascendancy or resuscitation of genes with HBD-like coding sequence requires the secondary acquisition of HBB-like promoter sequence via unequal crossing-over or interparalog gene conversion.

Original languageEnglish (US)
Pages (from-to)1219-1233
Number of pages15
JournalGenome Biology and Evolution
Volume6
Issue number5
DOIs
StatePublished - May 2014

Fingerprint

Globins
gene fusion
Gene Fusion
Mammals
mammal
mammals
gene
Genes
genes
Gene Conversion
gene conversion
crossing over
Shrews
thalassemia
Fetal Hemoglobin
mutants
Thalassemia
Hedgehogs
Erinaceidae
shrews

Keywords

  • Concerted evolution
  • Gene conversion
  • Gene duplication
  • Gene family evolution
  • Hemoglobin
  • Laurasiatheria
  • β-globin

ASJC Scopus subject areas

  • Ecology, Evolution, Behavior and Systematics
  • Genetics

Cite this

Repeated evolution of chimeric fusion genes in the β-globin gene family of laurasiatherian mammals. / Gaudry, Michael J.; Storz, Jay F.; Butts, Gary Tyler; Campbell, Kevin L.; Hoffmann, Federico G.

In: Genome Biology and Evolution, Vol. 6, No. 5, 05.2014, p. 1219-1233.

Research output: Contribution to journalArticle

Gaudry, Michael J. ; Storz, Jay F. ; Butts, Gary Tyler ; Campbell, Kevin L. ; Hoffmann, Federico G. / Repeated evolution of chimeric fusion genes in the β-globin gene family of laurasiatherian mammals. In: Genome Biology and Evolution. 2014 ; Vol. 6, No. 5. pp. 1219-1233.
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