Proteomic analysis of the cardiac extracellular matrix: clinical research applications

Merry L. Lindsey, Mira Jung, Michael E. Hall, Kristine Y. DeLeon-Pennell

Research output: Contribution to journalReview article

7 Citations (Scopus)

Abstract

Introduction: The cardiac extracellular matrix (ECM) provides anatomical, biochemical, and physiological support to the left ventricle. ECM proteins are difficult to detect using unbiased proteomic approaches due to solubility issues and a relatively low abundance compared to cytoplasmic and mitochondrial proteins present in highly prevalent cardiomyocytes. Areas covered: Proteomic capabilities have dramatically improved over the past 20 years, due to enhanced sample preparation protocols and increased capabilities in mass spectrometry (MS), database searching, and bioinformatics analysis. This review summarizes technological advancements made in proteomic applications that make ECM proteomics highly feasible. Expert commentary: Proteomic analysis of the ECM provides an important contribution to our understanding of the molecular and cellular processes associated with cardiovascular disease. Using results generated from proteomics approaches in basic science applications and integrating proteomics templates into clinical research protocols will aid in efforts to personalize medicine.

Original languageEnglish (US)
Pages (from-to)105-112
Number of pages8
JournalExpert Review of Proteomics
Volume15
Issue number2
DOIs
StatePublished - Feb 1 2018

Fingerprint

Proteomics
Extracellular Matrix
Research
Precision Medicine
Extracellular Matrix Proteins
Mitochondrial Proteins
Bioinformatics
Clinical Protocols
Computational Biology
Cardiac Myocytes
Solubility
Medicine
Heart Ventricles
Mass spectrometry
Mass Spectrometry
Cardiovascular Diseases
Databases

Keywords

  • Extracellular matrix
  • cardiac remodeling
  • cardiovascular disease
  • proteomics

ASJC Scopus subject areas

  • Biochemistry
  • Molecular Biology

Cite this

Proteomic analysis of the cardiac extracellular matrix : clinical research applications. / Lindsey, Merry L.; Jung, Mira; Hall, Michael E.; DeLeon-Pennell, Kristine Y.

In: Expert Review of Proteomics, Vol. 15, No. 2, 01.02.2018, p. 105-112.

Research output: Contribution to journalReview article

Lindsey, Merry L. ; Jung, Mira ; Hall, Michael E. ; DeLeon-Pennell, Kristine Y. / Proteomic analysis of the cardiac extracellular matrix : clinical research applications. In: Expert Review of Proteomics. 2018 ; Vol. 15, No. 2. pp. 105-112.
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