Detection and quantification of plant sphingolipids by LC-MS

Research output: Chapter in Book/Report/Conference proceedingChapter

7 Citations (Scopus)

Abstract

Sphingolipids generate signals in plants in response to a variety of biotic and abiotic stresses. Measuring these signaling compounds is complicated by the heterogeneity of structures within the sphingolipid family and the comparatively low concentration of their metabolites in plant tissues. To date, the only method with the sensitivity, dynamic range, and specificity to measure all sphingolipids in a plant extract is liquid chromatography coupled to mass spectrometry. The drawback of this method is the cost of the hardware, the expertise in mass spectrometry required to critically assess the outcome and the lack of suitable standards for accurate quantitative analysis. The goal of this chapter is to assist researchers in setting up experiments to measure sphingolipids and explain some of the pitfalls and solutions along the way.

Original languageEnglish (US)
Title of host publicationPlant Lipid Signaling Protocols
Pages93-101
Number of pages9
DOIs
StatePublished - Sep 4 2013

Publication series

NameMethods in Molecular Biology
Volume1009
ISSN (Print)1064-3745

Fingerprint

Sphingolipids
Mass Spectrometry
Plant Extracts
Liquid Chromatography
Research Personnel
Costs and Cost Analysis

Keywords

  • Ceramide
  • HPLC
  • Long-chain base
  • Long-chain base phosphate
  • Mass spectrometry
  • Sphingolipid
  • Sphingosine

ASJC Scopus subject areas

  • Molecular Biology
  • Genetics

Cite this

Markham, J. E. (2013). Detection and quantification of plant sphingolipids by LC-MS. In Plant Lipid Signaling Protocols (pp. 93-101). (Methods in Molecular Biology; Vol. 1009). https://doi.org/10.1007/978-1-62703-401-2-10

Detection and quantification of plant sphingolipids by LC-MS. / Markham, Jonathan E.

Plant Lipid Signaling Protocols. 2013. p. 93-101 (Methods in Molecular Biology; Vol. 1009).

Research output: Chapter in Book/Report/Conference proceedingChapter

Markham, JE 2013, Detection and quantification of plant sphingolipids by LC-MS. in Plant Lipid Signaling Protocols. Methods in Molecular Biology, vol. 1009, pp. 93-101. https://doi.org/10.1007/978-1-62703-401-2-10
Markham JE. Detection and quantification of plant sphingolipids by LC-MS. In Plant Lipid Signaling Protocols. 2013. p. 93-101. (Methods in Molecular Biology). https://doi.org/10.1007/978-1-62703-401-2-10
Markham, Jonathan E. / Detection and quantification of plant sphingolipids by LC-MS. Plant Lipid Signaling Protocols. 2013. pp. 93-101 (Methods in Molecular Biology).
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