Chemical shift tensors of nucleic acids: Theory and experiment

John Persons, Paolo Rossi, Gerard S. Harbison

Research output: Chapter in Book/Report/Conference proceedingChapter

Abstract

We examine the experimental and computational evidence for the effect of conformation on the chemical shielding tensors of 31P in the phosphodiester linkage and 13C in the ribose/deoxyribose moieties of nucleic acids. The phosphodiester group has considerable flexibility and a relatively flat potential surface, resulting in a diversity of conformations in nucleic acids; however, theory shows that the chemical shielding tensors of the low-energy conformations are very similar, which accounts for the very small chemical shift dispersion encountered experimentally. Calculations also show that the orientation of the phosphate chemical shielding tensor is invariant within a couple of degrees over all conformations. In contrast, the ribose/deoxyribose 13C chemical shielding tensors vary dramatically as a function of several conformational variables, and the major task of data analysis is integrating a large number of measurable isotropic chemical shifts and shift tensor elements into a unique conformational solution. We present computational data showing that the full chemical shielding tensors carry additional information not obtainable from isotropic chemical shifts alone.

Original languageEnglish (US)
Title of host publicationNMR Spectroscopy of Biological Solids
PublisherCRC Press
Pages305-316
Number of pages12
ISBN (Electronic)9781420027617
ISBN (Print)9781574444964
StatePublished - Jan 1 2005

Fingerprint

Deoxyribose
Ribose
Nucleic acids
Chemical shift
Nucleic Acids
Tensors
Shielding
Nucleic Acid Conformation
Conformations
Experiments
Phosphates
Surface potential

Keywords

  • Chemical shielding
  • RNA
  • Ribose
  • Tensor

ASJC Scopus subject areas

  • Chemistry(all)
  • Chemical Engineering(all)
  • Medicine(all)
  • Biochemistry, Genetics and Molecular Biology(all)

Cite this

Persons, J., Rossi, P., & Harbison, G. S. (2005). Chemical shift tensors of nucleic acids: Theory and experiment. In NMR Spectroscopy of Biological Solids (pp. 305-316). CRC Press.

Chemical shift tensors of nucleic acids : Theory and experiment. / Persons, John; Rossi, Paolo; Harbison, Gerard S.

NMR Spectroscopy of Biological Solids. CRC Press, 2005. p. 305-316.

Research output: Chapter in Book/Report/Conference proceedingChapter

Persons, J, Rossi, P & Harbison, GS 2005, Chemical shift tensors of nucleic acids: Theory and experiment. in NMR Spectroscopy of Biological Solids. CRC Press, pp. 305-316.
Persons J, Rossi P, Harbison GS. Chemical shift tensors of nucleic acids: Theory and experiment. In NMR Spectroscopy of Biological Solids. CRC Press. 2005. p. 305-316
Persons, John ; Rossi, Paolo ; Harbison, Gerard S. / Chemical shift tensors of nucleic acids : Theory and experiment. NMR Spectroscopy of Biological Solids. CRC Press, 2005. pp. 305-316
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