Abolishing activity against ascorbate in a cytosolic ascorbate peroxidase from switchgrass

Frank A. Kovacs, Gautam Sarath, Kyle Woodworth, Paul Twigg, Christian M. Tobias

Research output: Contribution to journalArticle

4 Citations (Scopus)

Abstract

Switchgrass (Panicum virgatum L.) is being developed as a bioenergy species. Recently an early version of its genome has been released permitting a route to the cloning and analysis of key proteins. Ascorbate peroxidases (APx) are an important part of the antioxidant defense system of plant cells and present a well studied model to understand structure-function relationships. Analysis of the genome indicates that switchgrass encodes several cytosolic ascorbate peroxidases with apparent varying levels of tissue expression. A major cytosolic ascorbate peroxidase was thus selected for further studies. This gene was cloned and expressed in Escherichia coli cells to obtain purified active protein. Full heme incorporation of the enzyme was achieved utilizing slow growth and supplementing the media with 5-aminolevulinic acid. The enzyme was observed to be monomeric in solution via size exclusion chromatography. Activity toward ascorbate was observed that was non-Michaelis-Menten in nature. A site-directed mutant, R172S, was made in an attempt to differentiate activity against ascorbate versus other substrates. The R172S protein exhibited negligible ascorbate peroxidase activity, but showed near wild type activity toward other aromatic substrates.

Original languageEnglish (US)
Pages (from-to)45-52
Number of pages8
JournalPhytochemistry
Volume94
DOIs
StatePublished - Jan 1 2013

Fingerprint

Ascorbate Peroxidases
Panicum
Panicum virgatum
ascorbate peroxidase
Genes
Genome
Aminolevulinic Acid
aminolevulinic acid
Proteins
genome
Size exclusion chromatography
proteins
Cloning
Plant Cells
heme
Substrates
structure-activity relationships
Enzymes
bioenergy
enzymes

Keywords

  • ABTS
  • Ascorbate
  • Mutant
  • Panicum virgatum
  • Peroxidase
  • Poaceae

ASJC Scopus subject areas

  • Biochemistry
  • Molecular Biology
  • Plant Science
  • Horticulture

Cite this

Abolishing activity against ascorbate in a cytosolic ascorbate peroxidase from switchgrass. / Kovacs, Frank A.; Sarath, Gautam; Woodworth, Kyle; Twigg, Paul; Tobias, Christian M.

In: Phytochemistry, Vol. 94, 01.01.2013, p. 45-52.

Research output: Contribution to journalArticle

Kovacs, Frank A. ; Sarath, Gautam ; Woodworth, Kyle ; Twigg, Paul ; Tobias, Christian M. / Abolishing activity against ascorbate in a cytosolic ascorbate peroxidase from switchgrass. In: Phytochemistry. 2013 ; Vol. 94. pp. 45-52.
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