Qi Zhang, PhD

Assistant Professor

  • 65 Citations
  • 4 h-Index
20142019
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Genome Medicine & Life Sciences
Chip Mathematics
Chromatin Mathematics
Genes Medicine & Life Sciences
Sequencing Mathematics
Chromatin Immunoprecipitation Medicine & Life Sciences
Empirical Bayes Mathematics
Gene Regulatory Networks Medicine & Life Sciences

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Research Output 2014 2019

  • 65 Citations
  • 4 h-Index
  • 8 Article

Network-based feature selection reveals substructures of gene modules responding to salt stress in rice

Du, Q., Campbell, M., Yu, H., Liu, K., Walia, H., Zhang, Q. & Zhang, C., Jan 1 2019, In : Plant Direct. 3, 8, e00154.

Research output: Contribution to journalArticle

Open Access
Gene Regulatory Networks
salt stress
Feature extraction
Salt-Tolerance
rice
2 Citations (Scopus)

An empirical Bayes test for allelic-imbalance detection in ChIP-seq

Zhang, Q. & Keleş, S., Oct 1 2018, In : Biostatistics. 19, 4, p. 546-561 16 p.

Research output: Contribution to journalArticle

Empirical Bayes
Chip
Single nucleotide Polymorphism
Biostatistics
Binomial Model
19 Citations (Scopus)

Genome-wide alterations in hippocampal 5-hydroxymethylcytosine links plasticity genes to acute stress

Li, S., Papale, L. A., Zhang, Q., Madrid, A., Chen, L., Chopra, P., Keleş, S., Jin, P. & Alisch, R. S., Feb 1 2016, In : Neurobiology of Disease. 86, p. 99-108 10 p.

Research output: Contribution to journalArticle

Genome
Genes
Gene Expression
Epigenomics
Psychiatry
11 Citations (Scopus)

Sex-specific hippocampal 5-hydroxymethylcytosine is disrupted in response to acute stress

Papale, L. A., Li, S., Madrid, A., Zhang, Q., Chen, L., Chopra, P., Jin, P., Keleş, S. & Alisch, R. S., Dec 1 2016, In : Neurobiology of Disease. 96, p. 54-66 13 p.

Research output: Contribution to journalArticle

Psychiatry
Genome
Epigenomics
Genes
5-hydroxymethylcytosine
1 Citation (Scopus)

Systematic evaluation of the impact of ChIP-seq read designs on genome coverage, peak identification, and allele-specific binding detection

Zhang, Q., Zeng, X., Younkin, S., Kawli, T., Snyder, M. P. & Keleş, S., Feb 24 2016, In : BMC bioinformatics. 17, 1, 96.

Research output: Contribution to journalArticle

Chromatin Immunoprecipitation
Chromatin
Sequencing
Genome
Coverage