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2020

Assessment of the Dose–Response Relationship Between Folate Exposure and Cognitive Impairment: Synthesizing Data from Documented Studies

Wang, B., Sahyoun, N. R., Shao, K., Dutta, E. & Clarke, J., Feb 1 2020, In : Risk Analysis. 40, 2, p. 276-293 18 p.

Research output: Contribution to journalArticle

Association between baseline abundance of Peptoniphilus, a Gram-positive anaerobic coccus, and wound healing outcomes of DFUs

Min, K. R., Galvis, A., Nole, K. L. B., Sinha, R., Clarke, J., Kirsner, R. S. & Ajdic, D., Jan 1 2020, In : PloS one. 15, 1, e0227006.

Research output: Contribution to journalArticle

Open Access

Association Between Sulfur-Metabolizing Bacterial Communities in Stool and Risk of Distal Colorectal Cancer in Men

Nguyen, L. H., Ma, W., Wang, D. D., Cao, Y., Mallick, H., Gerbaba, T. K., Lloyd-Price, J., Abu-Ali, G., Hall, A. B., Sikavi, D., Drew, D. A., Mehta, R. S., Arze, C., Joshi, A. D., Yan, Y., Branck, T., DuLong, C., Ivey, K. L., Ogino, S., Rimm, E. B. & 5 others, Song, M., Garrett, W. S., Izard, J., Huttenhower, C. & Chan, A. T., Apr 2020, In : Gastroenterology. 158, 5, p. 1313-1325 13 p.

Research output: Contribution to journalArticle

Open Access

Chinese sweet tea (Rubus suavissimus) polyphefnols attenuate the allergic responses in a Balb/c mouse model of egg allergy

Mine, Y., Majumder, K., Jin, Y. & Zeng, Y., Apr 2020, In : Journal of Functional Foods. 67, 103827.

Research output: Contribution to journalArticle

Open Access

Determinations of the peroxidative susceptibilities of cod liver oils by a newly-developed 1H NMR-based method: Resistance of an antioxidant-fortified product isolated from pre-fermented sources

Percival, B. C., Zbasnik, R., Schlegel, V., Edgar, M., Zhang, J. & Grootveld, M., Feb 12 2020, In : BMC Research Notes. 13, 1, 73.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Development of Prolamin-Based Composite Nanoparticles for Controlled Release of Sulforaphane

Wang, L., Rose, D., Rao, P. & Zhang, Y., Jan 1 2020, (Accepted/In press) In : Journal of Agricultural and Food Chemistry.

Research output: Contribution to journalArticle

2 Scopus citations

Evaluation of N-terminal labeling mass spectrometry for characterization of partially hydrolyzed gluten proteins

Cao, W., Baumert, J. L. & Downs, M. L., Jan 6 2020, In : Journal of Proteomics. 210, 103538.

Research output: Contribution to journalArticle

Fermented foods in a global age: East meets West

Tamang, J. P., Cotter, P. D., Endo, A., Han, N. S., Kort, R., Liu, S. Q., Mayo, B., Westerik, N. & Hutkins, R., Jan 1 2020, In : Comprehensive Reviews in Food Science and Food Safety. 19, 1, p. 184-217 34 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Genome sequences of uncommon Shiga toxin-producing escherichia coli serotypes

Abdalhamid, B., McCutchen, E. L., Iwen, P. C., Gomes-Neto, J. C., Benson, A. K. & Hinrichs, S. H., Mar 5 2020, In : Microbiology Resource Announcements. 9, 10, e01496-19.

Research output: Contribution to journalArticle

Open Access

In vitro digestibility of proteins from historical and modern wheat cultivars

Gulati, P., Brahma, S., Graybosch, R. A., Chen, Y. & Rose, D. J., Apr 1 2020, In : Journal of the Science of Food and Agriculture. 100, 6, p. 2579-2584 6 p.

Research output: Contribution to journalArticle

Manipulation of the molecular spin crossover transition of Fe(H2B(pz)2)2(bipy) by addition of polar molecules

Costa, P. S., Hao, G., N'Diaye, A. T., Routaboul, L., Braunstein, P., Zhang, X., Zhang, J., Ekanayaka, T. K., Shi, Q. Y., Schlegel, V., Doudin, B., Enders, A. & Dowben, P. A., Jan 1 2020, In : Journal of Physics Condensed Matter. 32, 3, 034001.

Research output: Contribution to journalArticle

Oral intervention of Lactobacillus pentosus S-PT84 attenuates the allergenic responses in a BALB/C mouse model of egg allergy

Majumder, K., Jin, Y., Shibata, H. & Mine, Y., Apr 2020, In : Molecular Immunology. 120, p. 43-51 9 p.

Research output: Contribution to journalArticle

Prebiotic-Induced Anti-tumor Immunity Attenuates Tumor Growth

Li, Y., Elmén, L., Segota, I., Xian, Y., Tinoco, R., Feng, Y., Fujita, Y., Segura Muñoz, R. R., Schmaltz, R., Bradley, L. M., Ramer-Tait, A., Zarecki, R., Long, T., Peterson, S. N. & Ronai, Z. A., Feb 11 2020, In : Cell Reports. 30, 6, p. 1753-1766.e6

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Quantitative assessment of microbial quality and safety risk: A preliminary case study of strengthening raspberry supply system in Chile

Ortúzar, J. E., Dogan, O. B., Sotomayor, G., Jiménez, C., Clarke, J., Flores, R. A., Gray, G. M., Rupnow, J. H. & Wang, B., Jul 2020, In : Food Control. 113, 107166.

Research output: Contribution to journalArticle

Reduction in pathogenic load of wheat by tempering with saline organic acid solutions at different seasonal temperatures

Sabillón, L., Stratton, J., Rose, D. & Bianchini, A., Jan 16 2020, In : International Journal of Food Microbiology. 313, 108381.

Research output: Contribution to journalArticle

Shellfish Tropomyosin IgE Cross-Reactivity Differs Among Edible Insect Species

Palmer, L. K., Marsh, J. T., Lu, M., Goodman, R. E., Zeece, M. G. & Johnson, P. E., Apr 1 2020, In : Molecular Nutrition and Food Research. 64, 8, 1900923.

Research output: Contribution to journalArticle

Thermal processing of peanut impacts detection by current analytical techniques

Marsh, J. T., Jayasena, S., Gaskin, F., Baumert, J. L. & Johnson, P., May 30 2020, In : Food Chemistry. 313, 126019.

Research output: Contribution to journalArticle

Tri5 gene expression analysis during postharvest storage of wheat grain from field plots treated with a triazole and a strobilurin fungicide

Bolanos-Carriel, C., Wegulo, S. N., Baenziger, P. S., Eskridge, K. M., Funnell-Harris, D., Mcmaster, N., Schmale, D. G. & Hallen-Adams, H. E., Jan 1 2020, (Accepted/In press) In : Canadian Journal of Plant Pathology.

Research output: Contribution to journalArticle

Updated population minimal eliciting dose distributions for use in risk assessment of 14 priority food allergens

Remington, B. C., Westerhout, J., Meima, M. Y., Blom, W. M., Kruizinga, A. G., Wheeler, M. W., Taylor, S. L., Houben, G. F. & Baumert, J. L., May 2020, In : Food and Chemical Toxicology. 139, 111259.

Research output: Contribution to journalArticle

Utilization of egg white solids to improve the texture and cooking quality of cooked and frozen pasta

Xie, L., Nishijima, N., Oda, Y., Handa, A., Majumder, K., Xu, C. & Zhang, Y., Mar 2020, In : LWT. 122, 109031.

Research output: Contribution to journalArticle

Yield and quality in purple-grained wheat isogenic lines

Morgounov, A., Karaduman, Y., Akin, B., Aydogan, S., Baenziger, P. S., Bhatta, M., Chudinov, V., Dreisigacker, S., Govindan, V., Güler, S., Guzman, C., Nehe, A., Poudel, R., Rose, D., Gordeeva, E., Shamanin, V., Subasi, K., Zelenskiy, Y. & Khlestkina, E., Jan 8 2020, In : Agronomy. 10, 1, 86.

Research output: Contribution to journalArticle

Open Access
2019

Acclimation of consortium of micro-algae help removal of organic pollutants from meat processing wastewater

Hu, X., Meneses, Y. E., Stratton, J. & Wang, B., Mar 20 2019, In : Journal of Cleaner Production. 214, p. 95-102 8 p.

Research output: Contribution to journalArticle

2 Scopus citations

A double humanized blt-mice model featuring a stable human-like gut microbiome and human immune system

Daharsh, L., Zhang, J., Ramer-Tait, A. & Li, Q., Aug 2019, In : Journal of Visualized Experiments. 2019, 150, e59773.

Research output: Contribution to journalArticle

3 Scopus citations

A General Hybrid Clustering Technique

Amiri, S., Clarke, B. S., Clarke, J. L. & Koepke, H., Jul 3 2019, In : Journal of Computational and Graphical Statistics. 28, 3, p. 540-551 12 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

An in vitro enrichment strategy for formulating synergistic synbiotics

Kok, C. R., Quintero, D. F. G., Niyirora, C., Rose, D., Li, A. & Hutkins, R., Aug 1 2019, In : Applied and environmental microbiology. 85, 16, e01073-19.

Research output: Contribution to journalArticle

1 Scopus citations

Antibiotics and host-tailored probiotics similarly modulate effects on the developing avian microbiome, mycobiome, and host gene expression

Ward, T. L., Weber, B. P., Mendoza, K. M., Danzeisen, J. L., Llop, K., Lang, K., Clayton, J. B., Grace, E., Brannon, J., Radovic, I., Beauclaire, M., Heisel, T. J., Knights, D., Cardona, C., Kogut, M., Johnson, C., Noll, S. L., Arsenault, R., Reed, K. M. & Johnson, T. J., Jan 1 2019, In : mBio. 10, 5, e02171-19.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

A quantitative microbial risk assessment model of Campylobacter in broiler chickens: Evaluating processing interventions

Dogan, O. B., Clarke, J., Mattos, F. & Wang, B., Jun 2019, In : Food Control. 100, p. 97-110 14 p.

Research output: Contribution to journalArticle

2 Scopus citations

A systematic review and network meta-analysis of injectable antibiotic options for the control of bovine respiratory disease in the first 45 days post arrival at the feedlot

O'Connor, A. M., Hu, D., Totton, S. C., Scott, N., Winder, C. B., Wang, B., Wang, C., Glanville, J., Wood, H., White, B., Larson, R., Waldner, C. & Sargeant, J. M., Dec 1 2019, In : Animal health research reviews. 20, 2, p. 163-181 19 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Bacterial community structure and function distinguish gut sites in captive red-shanked doucs (Pygathrix nemaeus)

Clayton, J. B., Shields-Cutler, R. R., Hoops, S. L., Al-Ghalith, G. A., Sha, J. C. M., Johnson, T. J. & Knights, D., Oct 1 2019, In : American Journal of Primatology. 81, 10-11, e22977.

Research output: Contribution to journalArticle

Candida albicans quorum-sensing molecule farnesol modulates staphyloxanthin production and activates the thiol-based oxidative-stress response in Staphylococcus aureus

Vila, T., Kong, E. F., Ibrahim, A., Piepenbrink, K., Shetty, A. C., McCracken, C., Bruno, V. & Jabra-Rizk, M. A., Jan 1 2019, In : Virulence. 10, 1, p. 625-642 18 p.

Research output: Contribution to journalArticle

Open Access
4 Scopus citations

Characterization of Campylobacter jejuni, Campylobacter upsaliensis, and a novel Campylobacter sp. in a captive non-human primate zoological collection

Clayton, J. B., Danzeisen, J. L., Johnson, T. J., Trent, A. M., Hayer, S. S., Murphy, T., Wuenschmann, A., Elder, M., Shen, Z., Mannion, A., Bryant, E., Knights, D. & Fox, J. G., Apr 2019, In : Journal of medical primatology. 48, 2, p. 114-122 9 p.

Research output: Contribution to journalArticle

1 Scopus citations

Comparison of recovery and immunochemical detection of peanut proteins from differentially roasted peanut flour using ELISA

Jayasena, S., Koppelman, S. J., Nayak, B., Taylor, S. L. & Baumert, J. L., Sep 15 2019, In : Food Chemistry. 292, p. 32-38 7 p.

Research output: Contribution to journalArticle

Deriving individual threshold doses from clinical food challenge data for population risk assessment of food allergens

Westerhout, J., Baumert, J. L., Blom, W. M., Allen, K. J., Ballmer-Weber, B., Crevel, R. W. R., Dubois, A. E. J., Fernández-Rivas, M., Greenhawt, M. J., Hourihane, J. O. B., Koplin, J. J., Kruizinga, A. G., Le, T. M., Sampson, H. A., Shreffler, W. G., Turner, P. J., Taylor, S. L., Houben, G. F. & Remington, B. C., Nov 2019, In : Journal of Allergy and Clinical Immunology. 144, 5, p. 1290-1309 20 p.

Research output: Contribution to journalArticle

1 Scopus citations

Effect of saline organic acid solutions applied during soft wheat tempering on microbial load and flour functionality

Sabillón, L., Stratton, J., Rose, D. & Bianchini, A., Nov 1 2019, In : Cereal Chemistry. 96, 6, p. 1048-1059 12 p.

Research output: Contribution to journalArticle

1 Scopus citations
4 Scopus citations

Enhancing the Bioaccessibility of Phytosterols Using Nanoporous Corn and Wheat Starch Bioaerogels

Ubeyitogullari, A., Moreau, R., Rose, D. J., Zhang, J. & Ciftci, O. N., Jan 2019, In : European Journal of Lipid Science and Technology. 121, 1, 1700229.

Research output: Contribution to journalArticle

7 Scopus citations

Evidence-based approaches to the application of precautionary allergen labelling: Report from two iFAAM workshops

DunnGalvin, A., Roberts, G., Schnadt, S., Astley, S., Austin, M., Blom, W. M., Baumert, J., Chan, C. H., Crevel, R. W. R., Grimshaw, K. E. C., Kruizinga, A. G., Regent, L., Taylor, S., Walker, M. & Mills, E. N. C., Jan 1 2019, In : Clinical and Experimental Allergy. 49, 9, p. 1191-1200 10 p.

Research output: Contribution to journalArticle

3 Scopus citations

Experimental evidence for adaptation to species-specific gut microbiota in house mice

Moeller, A. H., Gomes-Neto, J. C., Mantz, S., Kittana, H., Munoz, R. R. S., Schmaltz, R. J., Ramer-Tait, A. E. & Nachman, M. W., Jan 1 2019, In : mSphere. 4, 4, e00387-19.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Frequentist and Bayesian approaches for food allergen risk assessment: risk outcome and uncertainty comparisons

Birot, S., Crépet, A., Remington, B. C., Madsen, C. B., Kruizinga, A. G., Baumert, J. L. & Brockhoff, P. B., Dec 1 2019, In : Scientific reports. 9, 1, 18206.

Research output: Contribution to journalArticle

Open Access

From signal to analytical reporting for allergen detection by mass spectrometry

Johnson, P. E. & Downs, M., Jan 1 2019, In : Journal of AOAC International. 102, 5, p. 1255-1262 8 p.

Research output: Contribution to journalArticle

Genes involved in galactooligosaccharide metabolism in lactobacillus reuteri and their ecological role in the gastrointestinal tract

Rattanaprasert, M., van Pijkeren, J. P., Ramer-Tait, A. E., Quintero, M., Kok, C. R., Walter, J. & Hutkins, R. W., Nov 1 2019, In : Applied and environmental microbiology. 85, 22, p. 1-15 15 p., 01788.

Research output: Contribution to journalArticle

Gut microbiota dependent anti-tumor immunity restricts melanoma growth in Rnf5 −/− mice

Li, Y., Tinoco, R., Elmén, L., Segota, I., Xian, Y., Fujita, Y., Sahu, A., Zarecki, R., Marie, K., Feng, Y., Khateb, A., Frederick, D. T., Ashkenazi, S. K., Kim, H., Perez, E. G., Day, C. P., Segura Muñoz, R. S., Schmaltz, R., Yooseph, S., Tam, M. A. & 22 others, Zhang, T., Avitan-Hersh, E., Tzur, L., Roizman, S., Boyango, I., Bar-Sela, G., Orian, A., Kaufman, R. J., Bosenberg, M., Goding, C. R., Baaten, B., Levesque, M. P., Dummer, R., Brown, K., Merlino, G., Ruppin, E., Flaherty, K., Ramer-Tait, A., Long, T., Peterson, S. N., Bradley, L. M. & Ronai, Z. A., Dec 1 2019, In : Nature communications. 10, 1, 1492.

Research output: Contribution to journalArticle

Open Access
10 Scopus citations

Histone acetylation increases in response to ferulic, gallic, and sinapic acids acting synergistically in vitro to inhibit Candida albicans yeast-to-hyphae transition

Câmara, C. R. S., Shi, Q., Pedersen, M., Zbasnik, R., Nickerson, K. W. & Schlegel, V., Feb 2019, In : Phytotherapy Research. 33, 2, p. 319-326 8 p.

Research output: Contribution to journalArticle

1 Scopus citations

Hydrodistillation Extraction Kinetics Regression Models for Essential Oil Yield and Composition in Juniperus virginiana, J. Excelsa, and J. Sabina

Semerdjieva, I. B., Shiwakoti, S., Cantrell, C. L., Zheljazkov, V. D., Astatkie, T., Schlegel, V. & Radoukova, T., Jan 1 2019, In : Molecules. 24, 5, 986.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Impact of wheat bran physical properties and chemical composition on whole grain flour mixing and baking properties

Navrotskyi, S., Guo, G., Baenziger, P. S., Xu, L. & Rose, D. J., Sep 2019, In : Journal of Cereal Science. 89, 102790.

Research output: Contribution to journalArticle

Improved extraction of peanut residues from a wheat flour matrix for immunochemical detection

Jayasena, S., Wijeratne, S. S. K., Taylor, S. L. & Baumert, J. L., Apr 25 2019, In : Food Chemistry. 278, p. 832-840 9 p.

Research output: Contribution to journalArticle

1 Scopus citations

Interventions Targeting Deep Tissue Lymph Nodes May Not Effectively Reduce the Risk of Salmonellosis from Ground Pork Consumption: A Quantitative Microbial Risk Assessment

Zhang, Y., O'Connor, A. M., Wang, C., Dickson, J. S., Hurd, H. S. & Wang, B., Oct 1 2019, In : Risk Analysis. 39, 10, p. 2237-2258 22 p.

Research output: Contribution to journalArticle

Open Access

In Vitro Bioaccessibility of Low-Crystallinity Phytosterol Nanoparticles Generated Using Nanoporous Starch Bioaerogels

Ubeyitogullari, A., Moreau, R., Rose, D. J. & Ciftci, O. N., Jul 2019, In : Journal of food science. 84, 7, p. 1812-1819 8 p.

Research output: Contribution to journalArticle

Local habitat, not phylogenetic relatedness, predicts gut microbiota better within folivorous than frugivorous lemur lineages

Greene, L. K., Clayton, J. B., Rothman, R. S., Semel, B. P., Semel, M. A., Gillespie, T. R., Wright, P. C. & Drea, C. M., Jun 1 2019, In : Biology Letters. 15, 6, 20190028.

Research output: Contribution to journalArticle

3 Scopus citations