College of Agricultural Sciences & Natural Resources

Research Output 1964 2020

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Review article
2015
159 Citations (Scopus)

Food processing and allergenicity

Verhoeckx, K. C. M., Vissers, Y. M., Baumert, J. L., Faludi, R., Feys, M., Flanagan, S., Herouet-Guicheney, C., Holzhauser, T., Shimojo, R., van der Bolt, N., Wichers, H. & Kimber, I., Jun 1 2015, In : Food and Chemical Toxicology. 80, p. 223-240 18 p.

Research output: Contribution to journalReview article

allergenicity
Food processing
Food Handling
food processing
Food
39 Citations (Scopus)

Frequency, severity and causes of unexpected allergic reactions to food: A systematic literature review

Versluis, A., Knulst, A. C., Kruizinga, A. G., Michelsen, A., Houben, G. F., Baumert, J. L. & van Os-Medendorp, H., Feb 1 2015, In : Clinical and Experimental Allergy. 45, 2, p. 347-367 21 p.

Research output: Contribution to journalReview article

Hypersensitivity
Food
Diet
Restaurants
Nuts
24 Citations (Scopus)

Gene regulation by dietary microRNAs

Zempleni, J., Baier, S. R., Howard, K. M. & Cui, J., Sep 25 2015, In : Canadian journal of physiology and pharmacology. 93, 12, p. 1097-1102 6 p.

Research output: Contribution to journalReview article

MicroRNAs
Genes
Milk
Food
Protein Biosynthesis
1 Citation (Scopus)

Large dsDNA chloroviruses encode diverse membrane transport proteins

Thiel, G., Greiner, T., Dunigan, D. D., Moroni, A. & Van Etten, J. L., May 1 2015, In : Virology. 479-480, p. 38-45 8 p.

Research output: Contribution to journalReview article

Membrane Transport Proteins
Aquaglyceroporins
Ligand-Gated Ion Channels
Chlorella
Chlorophyta
6 Citations (Scopus)

Major Histocompatibility Complex Class II Dextramers: New Tools for the Detection of antigen-Specific, CD4 T Cells in Basic and Clinical Research

Massilamany, C., Krishnan, B. & Reddy, J., Nov 2015, In : Scandinavian Journal of Immunology. 82, 5, p. 399-408 10 p.

Research output: Contribution to journalReview article

CD4 Antigens
Major Histocompatibility Complex
T-Lymphocytes
Research
Allergy and Immunology
69 Citations (Scopus)

miRNAs in atherosclerotic plaque initiation, progression, and rupture

Andreou, I., Sun, X., Stone, P. H., Edelman, E. R. & Feinberg, M. W., May 1 2015, In : Trends in Molecular Medicine. 21, 5, p. 307-318 12 p.

Research output: Contribution to journalReview article

Atherosclerotic Plaques
MicroRNAs
Rupture
Atherosclerosis
Physiological Phenomena
38 Citations (Scopus)

Mitochondrial Protein Quality Control: The Mechanisms Guarding Mitochondrial Health

Bohovych, I., Chan, S. S. L. & Khalimonchuk, O., Apr 20 2015, In : Antioxidants and Redox Signaling. 22, 12, p. 977-994 18 p.

Research output: Contribution to journalReview article

Mitochondrial Proteins
Quality Control
Quality control
Health
Aging of materials
10 Citations (Scopus)

Regulation of endothelial cell metabolism: Just go with the flow

Sun, X. & Feinberg, M. W., Jan 3 2015, In : Arteriosclerosis, Thrombosis, and Vascular Biology. 35, 1, p. 13-15 3 p.

Research output: Contribution to journalReview article

Cellular Mechanotransduction
Phosphofructokinase-2
Kruppel-Like Transcription Factors
Energy Metabolism
Endothelial Cells
29 Citations (Scopus)

Resistant starches for the management of metabolic diseases

Bindels, L. B., Walter, J. & Ramer-Tait, A. E., Oct 9 2015, In : Current Opinion in Clinical Nutrition and Metabolic Care. 18, 6, p. 559-565 7 p.

Research output: Contribution to journalReview article

Metabolic Diseases
Starch
Bile Acids and Salts
Insulin Resistance
Adipose Tissue
44 Citations (Scopus)

S-glutathionylation enhances human cystathionine β-synthase activity under oxidative stress conditions

Niu, W. N., Yadav, P. K., Adamec, J. & Banerjee, R., Feb 10 2015, In : Antioxidants and Redox Signaling. 22, 5, p. 350-361 12 p.

Research output: Contribution to journalReview article

Cystathionine
Oxidative stress
Cysteine
Oxidative Stress
Post Translational Protein Processing
21 Citations (Scopus)

Steviol glycoside safety: Are highly purified steviol glycoside sweeteners food allergens?

Urban, J. D., Carakostas, M. C. & Taylor, S. L., Jan 1 2015, In : Food and Chemical Toxicology. 75, p. 71-78 8 p.

Research output: Contribution to journalReview article

Stevia
steviol
Allergies
Sweetening Agents
sweeteners
51 Citations (Scopus)

The injury resistant ability of melanopsin-expressing intrinsically photosensitive retinal ganglion cells

Cui, Q., Ren, C., Sollars, P. J., Pickard, G. E. & So, K. F., Jan 2 2015, In : Neuroscience. 284, p. 845-853 9 p.

Research output: Contribution to journalReview article

Aptitude
Retinal Ganglion Cells
Wounds and Injuries
Neurons
Retina
15 Citations (Scopus)

The Neurobiology of Circadian Rhythms

Sollars, P. J. & Pickard, G. E., Dec 2015, In : Psychiatric Clinics of North America. 38, 4, p. 645-665 21 p.

Research output: Contribution to journalReview article

Suprachiasmatic Nucleus
Neurobiology
Circadian Rhythm
Mood Disorders
Mammals
2 Citations (Scopus)
Wine
wines
markets
Economics
economics
34 Citations (Scopus)

Toward production of jet fuel functionality in oilseeds: Identification of FatB acyl-acyl carrier protein thioesterases and evaluation of combinatorial expression strategies in Camelina seeds

Kim, H. J., Silva, J. E., Vu, H. S., Mockaitis, K., Nam, J. W. & Cahoon, E. B., Jan 1 2015, In : Journal of experimental botany. 66, 14, p. 4251-4265 15 p.

Research output: Contribution to journalReview article

Cuphea
Camelina
Acyl Carrier Protein
acyl carrier protein
oilseeds
7 Citations (Scopus)

Vascular endothelial growth factor A: Just one of multiple mechanisms for sex-specific vascular development within the testis?

Sargent, K. M., McFee, R. M., Gomes, R. S. & Cupp, A. S., Jan 1 2015, In : Journal of Endocrinology. 227, 2, p. R31-R50

Research output: Contribution to journalReview article

Vascular Endothelial Growth Factor A
Blood Vessels
Testis
Sertoli Cells
Germ Cells
2014
26 Citations (Scopus)

Allergic sensitization: Screening methods

Ladics, G. S., Fry, J., Goodman, R., Herouet-Guicheney, C., Hoffmann-Sommergruber, K., Madsen, C. B., Penninks, A., Pomés, A., Roggen, E. L., Smit, J. & Wal, J. M., Apr 15 2014, In : Clinical and Translational Allergy. 4, 1, 13.

Research output: Contribution to journalReview article

Proteins
Food Handling
Food Hypersensitivity
Environmental Health
Biological Science Disciplines
46 Citations (Scopus)

Antioxidant gene therapy against neuronal cell death

Navarro-Yepes, J., Zavala-Flores, L., Anandhan, A., Wang, F., Skotak, M., Chandra, N., Li, M., Pappa, A., Martinez-Fong, D., Del Razo, L. M., Quintanilla-Vega, B. & Franco-Cruz, R., May 2014, In : Pharmacology and Therapeutics. 142, 2, p. 206-230 25 p.

Research output: Contribution to journalReview article

Neurodegenerative Diseases
Genetic Therapy
Cell Death
Antioxidants
Oxidative Stress
27 Citations (Scopus)

ATX1/AtCOMPASS and the H3K4me3 marks: How do they activate arabidopsis genes?

Fromm, M. & Avramova, Z., Oct 2014, In : Current Opinion in Plant Biology. 21, p. 75-82 8 p.

Research output: Contribution to journalReview article

Arabidopsis
histones
transcription (genetics)
nucleosomes
genes
37 Citations (Scopus)

Development and evolution of risk assessment for food allergens

Crevel, R. W. R., Baumert, J. L., Baka, A., Houben, G. F., Knulst, A. C., Kruizinga, A. G., Luccioli, S., Taylor, S. L. & Madsen, C. B., May 2014, In : Food and Chemical Toxicology. 67, p. 262-276 15 p.

Research output: Contribution to journalReview article

risk assessment process
allergens
Risk assessment
Allergens
risk assessment
34 Citations (Scopus)

Epidemiology and transmission of kaposi’s sarcoma-associated herpesvirus

Minhas, V. & Wood, C., Nov 4 2014, In : Viruses. 6, 11, p. 4178-4194 17 p.

Research output: Contribution to journalReview article

Human Herpesvirus 8
Epidemiology
Kaposi's Sarcoma
Primary Effusion Lymphoma
Mediterranean Region
13 Citations (Scopus)

Intricacies of cardiac damage in coxsackievirus B3 infection: Implications for therapy

Massilamany, C., Gangaplara, A. & Reddy, J., Dec 15 2014, In : International Journal of Cardiology. 177, 2, p. 330-339 10 p.

Research output: Contribution to journalReview article

Coxsackievirus Infections
Myocarditis
Dilated Cardiomyopathy
Human Enterovirus B
Therapeutics
53 Citations (Scopus)

Kernel-based whole-genome prediction of complex traits: A review

Gota, M. & Gianola, D., Jan 1 2014, In : Frontiers in Genetics. 5, OCT, 363.

Research output: Contribution to journalReview article

Genome
Breeding
Research Personnel
Technology
Machine Learning
38 Citations (Scopus)

Microbiota, oral microbiome, and pancreatic cancer

Michaud, D. S. & Izard, J., Jan 1 2014, In : Cancer Journal (United States). 20, 3, p. 203-206 4 p.

Research output: Contribution to journalReview article

Mouth Neoplasms
Microbiota
Pancreatic Neoplasms
Disease Susceptibility
Life Style
20 Citations (Scopus)

Nuclear receptors and epigenetic regulation: Opportunities for nutritional targeting and disease prevention

Romagnolo, D. F., Zempleni, J. & Selmin, O. I., Jan 1 2014, In : Advances in Nutrition. 5, 4, p. 373-385 13 p.

Research output: Contribution to journalReview article

disease prevention
Cytoplasmic and Nuclear Receptors
Epigenomics
epigenetics
receptors
63 Citations (Scopus)

Precautionary labelling of foods for allergen content: Are we ready for a global framework?

Allen, K. J., Turner, P. J., Pawankar, R., Taylor, S., Sicherer, S., Lack, G., Rosario, N., Ebisawa, M., Wong, G., Mills, E. N. C., Beyer, K., Fiocchi, A. & Sampson, H. A., Apr 30 2014, In : World Allergy Organization Journal. 7, 1, 10.

Research output: Contribution to journalReview article

Food Labeling
Allergens
Legislation
Food Safety
Food
18 Citations (Scopus)

Rational framework for evaluating the next generation of vaccines against mycobacterium avium subspecies paratuberculosis

Bannantine, J. P., Hines, M. E., Bermudez, L. E., Talaat, A. M., Sreevatsan, S., Stabel, J. R., Chang, Y. F., Coussens, P. M., Barletta, R. G., Davis, W. C., Collins, D. M., Gro¨hn, Y. T. & Kapur, V., Jan 1 2014, In : Frontiers in Cellular and Infection Microbiology. 4, SEP, Article 126.

Research output: Contribution to journalReview article

Mycobacterium avium subsp. paratuberculosis
Vaccines
Paratuberculosis
Macrophages
United States Department of Agriculture
72 Citations (Scopus)

Role of miR-181 family in regulating vascular inflammation and immunity

Sun, X., Sit, A. & Feinberg, M. W., Apr 1 2014, In : Trends in Cardiovascular Medicine. 24, 3, p. 105-112 8 p.

Research output: Contribution to journalReview article

Blood Vessels
Immunity
Inflammation
Critical Pathways
MicroRNAs
29 Citations (Scopus)

The current state of drug discovery and a potential role for NMR metabolomics

Powers, R., Jul 24 2014, In : Journal of Medicinal Chemistry. 57, 14, p. 5860-5870 11 p.

Research output: Contribution to journalReview article

Metabolomics
Drug Discovery
Drug Industry
Creativity
Drug Design
14 Citations (Scopus)

The unseen world: Environmental microbial sequencing and identification methods for ecologists

Zimmerman, N., Izard, J., Klatt, C., Zhou, J. & Aronson, E., May 2014, In : Frontiers in Ecology and the Environment. 12, 4, p. 224-231 8 p.

Research output: Contribution to journalReview article

identification method
ecologists
ecosystem response
biogeography
microorganisms
17 Citations (Scopus)

Translating reference doses into allergen management practice: Challenges for stakeholders

Crevel, R. W. R., Baumert, J. L., Luccioli, S., Baka, A., Hattersley, S., Hourihane, J. O. B., Ronsmans, S., Timmermans, F., Ward, R. & Chung, Y. J., May 2014, In : Food and Chemical Toxicology. 67, p. 277-287 11 p.

Research output: Contribution to journalReview article

Practice Management
risk management
Risk Management
allergens
Risk management
55 Citations (Scopus)

Understanding and manipulating plant lipid composition: Metabolic engineering leads the way

Napier, J. A., Haslam, R. P., Beaudoin, F. & Cahoon, E. B., Jun 2014, In : Current Opinion in Plant Biology. 19, p. 68-75 8 p.

Research output: Contribution to journalReview article

synthetic biology
metabolic engineering
oilseed crops
diacylglycerols
lipid composition
90 Citations (Scopus)

Update of the WHO/IUIS Allergen Nomenclature Database based on analysis of allergen sequences

Radauer, C., Nandy, A., Ferreira, F., Goodman, R. E., Larsen, J. N., Lidholm, J., Pomés, A., Raulf-Heimsoth, M., Rozynek, P., Thomas, W. R. & Breiteneder, H., Apr 2014, In : Allergy: European Journal of Allergy and Clinical Immunology. 69, 4, p. 413-419 7 p.

Research output: Contribution to journalReview article

Terminology
Allergens
Sequence Analysis
Databases
Names
2013
32 Citations (Scopus)

A systematic review of the effect of thermal processing on the allergenicity of tree nuts

Masthoff, L. J., Hoff, R., Verhoeckx, K. C. M., Van Os-Medendorp, H., Michelsen-Huisman, A., Baumert, J. L., Pasmans, S. G., Meijer, Y. & Knulst, A. C., Aug 1 2013, In : Allergy: European Journal of Allergy and Clinical Immunology. 68, 8, p. 983-993 11 p.

Research output: Contribution to journalReview article

Nuts
Corylus
Hot Temperature
Seed Storage Proteins
Bertholletia
24 Citations (Scopus)

Autoimmunity in viral myocarditis

Reddy, J., Massilamany, C., Buskiewicz, I. & Huber, S. A., Jul 1 2013, In : Current Opinion in Rheumatology. 25, 4, p. 502-508 7 p.

Research output: Contribution to journalReview article

Myocarditis
Autoimmunity
Epitopes
Myosin Heavy Chains
Innate Immunity
18 Citations (Scopus)
Human Herpesvirus 1
Sensory Receptor Cells
Viruses
Neurons
Apoptosis
28 Citations (Scopus)

Challenges in testing genetically modified crops for potential increases in endogenous allergen expression for safety

Panda, R., Ariyarathna, H., Amnuaycheewa, P., Tetteh, A., Pramod, S. N., Taylor, S. L., Ballmer-Weber, B. K. & Goodman, R. E., Feb 1 2013, In : Allergy: European Journal of Allergy and Clinical Immunology. 68, 2, p. 142-151 10 p.

Research output: Contribution to journalReview article

Allergens
Safety
Soybeans
Zea mays
Genetically Modified Plants
33 Citations (Scopus)

Epigenetic pathways and glioblastoma treatment

Clarke, J., Penas, C., Pastori, C., Komotar, R. J., Bregy, A., Shah, A. H., Wahlestedt, C. & Ayad, N. G., 2013, In : Epigenetics. 8, 8, p. 785-795 11 p.

Research output: Contribution to journalReview article

Glioblastoma
Epigenomics
Therapeutics
Neoplasms
temozolomide
17 Citations (Scopus)

Global NeuroAIDS roundtable

Joseph, J., Achim, C. L., Boivin, M. J., Brew, B. J., Clifford, D. B., Colosi, D. A., Ellis, R. J., Heaton, R. K., Gallo-Diop, A., Grant, I., Kanmogne, G. D., Kumar, M., Letendre, S., Marcotte, T. D., Nath, A., Pardo, C. A., Paul, R. H., Pulliam, L., Robertson, K., Royal, W. & 6 others, Sacktor, N., Sithinamsuwan, P., Smith, D. M., Valcour, V., Wigdahl, B. & Wood, C., Feb 18 2013, In : Journal of neurovirology. 19, 1, p. 1-9 9 p.

Research output: Contribution to journalReview article

Acquired Immunodeficiency Syndrome
HIV
National Institute of Mental Health (U.S.)
Research
Eastern Europe
11 Citations (Scopus)

Life-cycle, total-industry genetic improvement of feed efficiency in beef cattle: Blueprint for the Beef Improvement Federation11The development of this commentary was supported by the Beef Improvement Federation

Nielsen, M. K., MacNeil, M. D., Dekkers, J. C. M., Crews, D. H., Rathje, T. A., Enns, R. M. & Weaber, R. L., Dec 1 2013, In : Professional Animal Scientist. 29, 6, p. 559-565 7 p.

Research output: Contribution to journalReview article

Life Cycle Stages
beef cattle
genetic improvement
life cycle (organisms)
Industry
81 Citations (Scopus)

Plant sphingolipids: Function follows form

Markham, J. E., Lynch, D. V., Napier, J. A., Dunn, T. M. & Cahoon, E. B., Jun 1 2013, In : Current Opinion in Plant Biology. 16, 3, p. 350-357 8 p.

Research output: Contribution to journalReview article

sphingolipids
hydroxylation
membrane proteins
analytical methods
Arabidopsis
16 Citations (Scopus)

Prebiotic mechanisms, functions and applications - A review

Blatchford, P., Ansell, J., De Godoy, M. R. C., Fahey, G., Garcia-Mazcorro, J. F., Gibson, G. R., Goh, Y. J., Hotchkiss, A. T., Hutkins, R., LaCroix, C., Rastall, R. A., Reimer, R. A., Schoterman, M., Van Sinderen, D., Venema, K. & Whelan, K., 2013, In : International Journal of Probiotics and Prebiotics. 8, 4, p. 109-131 23 p.

Research output: Contribution to journalReview article

Prebiotics
prebiotics
Microbiota
Bifidobacterium
Probiotics
221 Citations (Scopus)

Proline mechanisms of stress survival

Liang, X., Zhang, L., Natarajan, S. K. & Becker, D. F., Sep 20 2013, In : Antioxidants and Redox Signaling. 19, 9, p. 998-1011 14 p.

Research output: Contribution to journalReview article

Proline
Survival
Reactive Oxygen Species
Metabolism
Mitochondria
75 Citations (Scopus)

Pseudomonas HopU1 modulates plant immune receptor levels by blocking the interaction of their mRNAs with GRP7

Nicaise, V., Joe, A., Jeong, B. R., Korneli, C., Boutrot, F., Westedt, I., Staiger, D., Alfano, J. R. & Zipfel, C., Mar 6 2013, In : EMBO Journal. 32, 5, p. 701-712 12 p.

Research output: Contribution to journalReview article

Pseudomonas
Immunity
Messenger RNA
Virulence
ADP Ribose Transferases
34 Citations (Scopus)

SLC31 (CTR) family of copper transporters in health and disease

Kim, H., Wu, X. & Lee, J., Apr 1 2013, In : Molecular Aspects of Medicine. 34, 2-3, p. 561-570 10 p.

Research output: Contribution to journalReview article

Copper
Health
Detoxification
Poisons
Metabolic Networks and Pathways
13 Citations (Scopus)

Vascular contributions to early ovarian development: Potential roles of VEGFA isoforms

McFee, R. M. & Cupp, A. S., Feb 4 2013, In : Reproduction, Fertility and Development. 25, 2, p. 333-342 10 p.

Research output: Contribution to journalReview article

vascular endothelial growth factor A
ovarian development
blood vessels
Vascular Endothelial Growth Factor A
Blood Vessels
8 Citations (Scopus)

Working hard for recovery: Mitotic kinases in the DNA damage checkpoint

Peng, A., Apr 23 2013, In : Cell and Bioscience. 3, 1, 20.

Research output: Contribution to journalReview article

DNA Damage
Phosphotransferases
Cell Cycle Checkpoints
Recovery
DNA
2012
46 Citations (Scopus)

Analysis of bacterial biofilms using NMR-based metabolomics

Zhang, B. & Powers, R., Jun 1 2012, In : Future Medicinal Chemistry. 4, 10, p. 1273-1306 34 p.

Research output: Contribution to journalReview article

Metabolomics
Biofilms
Biological Phenomena
Metabolome
Microbial Drug Resistance
16 Citations (Scopus)

Biotin requirements for DNA damage prevention

Zempleni, J., Teixeira, D. C., Kuroishi, T., Cordonier, E. L. & Baier, S., May 1 2012, In : Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis. 733, 1-2, p. 58-60 3 p.

Research output: Contribution to journalReview article

Biotin
Histones
DNA Damage
Biotinylation
Genomic Instability
64 Citations (Scopus)

Chloroviruses: Not your everyday plant virus

Van Etten, J. L. & Dunigan, D. D., Jan 1 2012, In : Trends in Plant Science. 17, 1, p. 1-8 8 p.

Research output: Contribution to journalReview article

Chlorovirus
plant viruses
viruses
Paramecium bursaria Chlorella virus 1
Phycodnaviridae