College of Agricultural Sciences & Natural Resources

Research Output 1964 2020

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Review article
5 Citations (Scopus)

A community resource of experimental data for NMR / X-ray crystal structure pairs

Everett, J. K., Tejero, R., Murthy, S. B. K., Acton, T. B., Aramini, J. M., Baran, M. C., Benach, J., Cort, J. R., Eletsky, A., Forouhar, F., Guan, R., Kuzin, A. P., Lee, H. W., Liu, G., Mani, R., Mao, B., Mills, J. L., Montelione, A. F., Pederson, K., Powers, R. & 16 others, Ramelot, T., Rossi, P., Seetharaman, J., Snyder, D., Swapna, G. V. T., Vorobiev, S. M., Wu, Y., Xiao, R., Yang, Y., Arrowsmith, C. H., Hunt, J. F., Kennedy, M. A., Prestegard, J. H., Szyperski, T., Tong, L. & Montelione, G. T., Jan 1 2016, In : Protein Science. 25, 1, p. 30-45 16 p.

Research output: Contribution to journalReview article

Crystal structure
Nuclear magnetic resonance
X-Rays
X rays
Biomolecular Nuclear Magnetic Resonance
4 Citations (Scopus)

A comparative analysis of the mitogenic response of intestinal intraepithelial lymphocytes in various age groups of turkeys

Agrawal, P. K. & Reynolds, D. L., Jan 1 1999, In : Avian diseases. 43, 3, p. 376-383 8 p.

Research output: Contribution to journalReview article

lymphocytes
Age Groups
Lymphocytes
Mitogens
blood
24 Citations (Scopus)

A comparison of whole virus and recombinant transmembrane ELISA and immunodiffusion for detection of ovine lentivirus antibodies in Italian sheep flocks

Rosati, S., Kwang, J., Tolari, F. & Keen, J., Jan 1 1994, In : Veterinary Research Communications. 18, 1, p. 73-80 8 p.

Research output: Contribution to journalReview article

Lentivirus
Immunodiffusion
Sheep
flocks
Enzyme-Linked Immunosorbent Assay
191 Citations (Scopus)

A critical assessment of the "sterile womb" and "in utero colonization" hypotheses: Implications for research on the pioneer infant microbiome

Perez-Muñoz, M. E., Arrieta, M. C., Ramer-Tait, A. E. & Walter, J., Jan 1 2017, In : Microbiome. 5, 1, 48.

Research output: Contribution to journalReview article

Microbiota
Germ-Free Life
Research
Placenta
Parturition
544 Citations (Scopus)

A delicate balance: Homeostatic control of copper uptake and distribution

Peña, M. M. O., Lee, J. & Thiele, D. J., Jul 12 1999, In : Journal of Nutrition. 129, 7, p. 1251-1260 10 p.

Research output: Contribution to journalReview article

Copper
copper
uptake mechanisms
proteins
Proteins
6 Citations (Scopus)

Advances in exploration of machine learning methods for predicting functional class and interaction profiles of proteins and peptides irrespective of sequence homology

Cui, J., Han, L., Lin, H., Tang, Z., Ji, Z., Cao, Z., Li, Y. & Chen, Y., May 1 2007, In : Current Bioinformatics. 2, 2, p. 95-112 18 p.

Research output: Contribution to journalReview article

Sequence Homology
Peptides
Learning systems
Homology
Machine Learning
26 Citations (Scopus)

Advances in grain sorghum and its co-products as a human health promoting dietary system

Althwab, S., Carr, T. P., Weller, C. L., Dweikat, I. M. & Schlegel, V., Nov 1 2015, In : Food Research International. 77, p. 349-359 11 p.

Research output: Contribution to journalReview article

health promotion
coproducts
Sorghum
grain sorghum
human health
33 Citations (Scopus)

Advances in nuclear magnetic resonance for drug discovery

Powers, R., Oct 1 2009, In : Expert Opinion on Drug Discovery. 4, 10, p. 1077-1098 22 p.

Research output: Contribution to journalReview article

Drug Discovery
Magnetic Resonance Spectroscopy
Technology
Molecular Sequence Annotation
Metabolomics
44 Citations (Scopus)

AIDS and associated malignancies

Wood, C. & Harrington, W., Dec 29 2005, In : Cell Research. 15, 11-12, p. 947-952 6 p.

Research output: Contribution to journalReview article

Acquired Immunodeficiency Syndrome
HIV-1
Human Herpesvirus 8
Neoplasms
Non-Hodgkin's Lymphoma
1 Citation (Scopus)

AIDS-assoicated viral oncogenesis. Overview.

Wood, C., 2007, In : Cancer treatment and research. 133, p. 1-19 19 p.

Research output: Contribution to journalReview article

Carcinogenesis
Acquired Immunodeficiency Syndrome
Neoplasms

Algal-based biofuel generation through flue gas and wastewater utilization: a sustainable prospective approach

Kothari, R., Ahmad, S., Pathak, V. V., Pandey, A., Kumar, A., Shankarayan, R., Black, P. N. & Tyagi, V. V., Jan 1 2019, (Accepted/In press) In : Biomass Conversion and Biorefinery.

Research output: Contribution to journalReview article

Waste utilization
Biofuels
Flue gases
Biomass
Wastewater
149 Citations (Scopus)

Allergenicity assessment of genetically modified crops - What makes sense?

Goodman, R. E., Vieths, S., Sampson, H. A., Hill, D., Ebisawa, M., Taylor, S. L. & Van Ree, R., Jan 1 2008, In : Nature Biotechnology. 26, 1, p. 73-81 9 p.

Research output: Contribution to journalReview article

Crops
Safety
Food Quality
Pesticides
Acoustic waves
73 Citations (Scopus)

Allergen immunoassays-considerations for use of naturally incurred standards

Taylor, S. L., Nordlee, J. A., Niemann, L. M. & Lambrecht, D. M., Sep 1 2009, In : Analytical and Bioanalytical Chemistry. 395, 1, p. 83-92 10 p.

Research output: Contribution to journalReview article

Immunoassay
Allergens
Enzyme-Linked Immunosorbent Assay
Food
Food Handling
26 Citations (Scopus)

Allergic sensitization: Screening methods

Ladics, G. S., Fry, J., Goodman, R., Herouet-Guicheney, C., Hoffmann-Sommergruber, K., Madsen, C. B., Penninks, A., Pomés, A., Roggen, E. L., Smit, J. & Wal, J. M., Apr 15 2014, In : Clinical and Translational Allergy. 4, 1, 13.

Research output: Contribution to journalReview article

Proteins
Food Handling
Food Hypersensitivity
Environmental Health
Biological Science Disciplines
144 Citations (Scopus)

Alphaherpesvirus latency: its role in disease and survival of the virus in nature.

Jones, C., 1998, In : Advances in virus research. 51, p. 81-133 53 p.

Research output: Contribution to journalReview article

Alphaherpesvirinae
Virus Latency
Herpesviridae Infections
Virus Diseases
DNA Replication
204 Citations (Scopus)

Alternative NAD(P)H dehydrogenases of plant mitochondria

Rasmusson, A. G., Soole, K. L. & Elthon, T. E., Jul 30 2004, In : Annual Review of Plant Biology. 55, p. 23-39 17 p.

Research output: Contribution to journalReview article

Mitochondria
NAD(P)H dehydrogenase (quinone)
NAD
Oxidoreductases
mitochondria
3 Citations (Scopus)
Patents
Fungi
Pharmaceutical Preparations
Poisons
Fungal Structures
84 Citations (Scopus)

Amino acid osmolytes in regulatory volume decrease and isovolumetric regulation in brain cells: Contribution and mechanisms

Pasantes-Morales, H., Franco, R., Torres-Marquez, M. E., Hernández-Fonseca, K. & Ortega, A., Jan 1 2000, In : Cellular Physiology and Biochemistry. 10, 5-6, p. 361-370 10 p.

Research output: Contribution to journalReview article

Amino Acids
Brain
Cell Size
Osmolar Concentration
Anions
46 Citations (Scopus)

Analysis of bacterial biofilms using NMR-based metabolomics

Zhang, B. & Powers, R., Jun 1 2012, In : Future Medicinal Chemistry. 4, 10, p. 1273-1306 34 p.

Research output: Contribution to journalReview article

Metabolomics
Biofilms
Biological Phenomena
Metabolome
Microbial Drug Resistance
101 Citations (Scopus)

Analysis of resveratrol in wine by capillary electrophoresis

Gu, X., Chu, Q., O'Dwyer, M. & Zeece, M., Jun 9 2000, In : Journal of Chromatography A. 881, 1-2, p. 471-481 11 p.

Research output: Contribution to journalReview article

Capillary electrophoresis
Wine
Capillary Electrophoresis
High performance liquid chromatography
Glycosides
449 Citations (Scopus)

A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes

Roberts, R. J., Belfort, M., Bestor, T., Bhagwat, A. S., Bickle, T. A., Bitinaite, J., Blumenthal, R. M., Degtyarev, S. K., Dryden, D. T. F., Dybvig, K., Firman, K., Gromova, E. S., Gumport, R. I., Halford, S. E., Hattman, S., Heitman, J., Hornby, D. P., Janulaitis, A., Jeltsch, A., Josephsen, J. & 27 others, Kiss, A., Klaenhammer, T. R., Kobayashi, I., Kong, H., Krüger, D. H., Lacks, S., Marinus, M. G., Miyahara, M., Morgan, R. D., Murray, N. E., Nagaraja, V., Piekarowicz, A., Pingoud, A., Raleigh, E., Rao, D. N., Reich, N., Repin, V. E., Selker, E. U., Shaw, P. C., Stein, D. C., Stoddard, B. L., Szybalski, W., Trautner, T. A., Van Etten, J. L., Vitor, J. M. B., Wilson, G. G. & Xu, S. Y., Apr 1 2003, In : Nucleic acids research. 31, 7, p. 1805-1812 8 p.

Research output: Contribution to journalReview article

Endonucleases
DNA Restriction Enzymes
Methyltransferases
Terminology
Microbial Genome
33 Citations (Scopus)

A novel, enigmatic histone modification: Biotinylation of histones by holocarboxylase synthetase

Hassan, Y. I. & Zempleni, J., Dec 1 2008, In : Nutrition Reviews. 66, 12, p. 721-725 5 p.

Research output: Contribution to journalReview article

Histone Code
Biotinylation
Histones
Biotin
holocarboxylase synthetases
46 Citations (Scopus)

Antioxidant gene therapy against neuronal cell death

Navarro-Yepes, J., Zavala-Flores, L., Anandhan, A., Wang, F., Skotak, M., Chandra, N., Li, M., Pappa, A., Martinez-Fong, D., Del Razo, L. M., Quintanilla-Vega, B. & Franco-Cruz, R., May 2014, In : Pharmacology and Therapeutics. 142, 2, p. 206-230 25 p.

Research output: Contribution to journalReview article

Neurodegenerative Diseases
Genetic Therapy
Cell Death
Antioxidants
Oxidative Stress
390 Citations (Scopus)

Apoptosis and glutathione: Beyond an antioxidant

Franco, R. & Cidlowski, J. A., Aug 10 2009, In : Cell Death and Differentiation. 16, 10, p. 1303-1314 12 p.

Research output: Contribution to journalReview article

Glutathione
Cell Death
Antioxidants
Apoptosis
Death Domain Receptors
17 Citations (Scopus)

Application of the genome sequence to address concerns that Mycobacterium avium subspecies paratuberculosis might be a foodborne pathogen.

Bannantine, J. P., Barletta, R. G., Stabel, J. R., Paustian, M. L. & Kapur, V., Jan 1 2004, In : Foodborne pathogens and disease. 1, 1, p. 3-15 13 p.

Research output: Contribution to journalReview article

Mycobacterium avium subsp. paratuberculosis
Mycobacterium avium
paratuberculosis
food pathogens
Genome

Approaches to the safety assessment of novel foods and novel gene products

Taylor, S. L., May 1 2002, In : Comments on Toxicology. 8, 3, p. 241-250 10 p.

Research output: Contribution to journalReview article

Safety
Food
Genes
3 Citations (Scopus)

A rapid virus neutralization assay for Newcastle disease virus with the swine testicular continuous cell line

Reynolds, D. L. & Maraqa, A. D., Jan 1 1999, In : Avian diseases. 43, 3, p. 564-571 8 p.

Research output: Contribution to journalReview article

Newcastle disease virus
neutralization tests
fibroblasts
Chickens
embryo (animal)
2 Citations (Scopus)

A review of animal models used to evaluate potential allergenicity of genetically modified organisms (GMOs)

Marsteller, N., Bøgh, K. L., Goodman, R. E. & Epstein, M. M., Feb 4 2015, In : Drug Discovery Today: Disease Models. 17-18, p. 81-88 8 p.

Research output: Contribution to journalReview article

Genetically Modified Organisms
Animal Models
Peer Review
Food Safety
Diet
120 Citations (Scopus)
bovine respiratory disease
vaccines
Biological Sciences
cattle
sensory neurons
12 Citations (Scopus)

A review of the epidemiology of cancers at the University Teaching Hospital, Lusaka, Zambia

Bowa, K., Wood, C., Chao, A., Chintu, C., Mudenda, V. & Chikwenya, M., Jan 1 2009, In : Tropical Doctor. 39, 1, p. 5-7 3 p.

Research output: Contribution to journalReview article

Eye Neoplasms
Zambia
Teaching Hospitals
Uterine Cervical Neoplasms
Kaposi's Sarcoma
7 Citations (Scopus)

A Review on the Potential Human Health Benefits of the Black Walnut: A Comparison with the English Walnuts and Other Tree Nuts

Câmara, C. R. S. & Schlegel, V., Oct 2 2016, In : International Journal of Food Properties. 19, 10, p. 2175-2189 15 p.

Research output: Contribution to journalReview article

Juglans
Juglans nigra
Juglans regia
Nuts
Insurance Benefits
1 Citation (Scopus)

Arsenic-induced neurotoxicity: a mechanistic appraisal

Garza-Lombó, C., Pappa, A., Panayiotidis, M. I., Gonsebatt, M. E. & Franco, R., Dec 1 2019, In : Journal of Biological Inorganic Chemistry. 24, 8, p. 1305-1316 12 p.

Research output: Contribution to journalReview article

Arsenic
Neurology
Neurodegenerative Diseases
Cognition
Central Nervous System
7 Citations (Scopus)
animal reproduction
Reproduction
ewes
Hot Temperature
metabolic diseases
78 Citations (Scopus)

Assessing genetically modified crops to minimize the risk of increased food allergy: A review

Goodman, R. E., Hefle, S. L., Taylor, S. L. & Van Ree, R., Jun 1 2005, In : International archives of allergy and immunology. 137, 2, p. 153-166 14 p.

Research output: Contribution to journalReview article

Food Hypersensitivity
Allergens
Food
Immunoglobulin E
Genes

Assessment of the allergenicity of foods produced through agricultural biotechnology

Taylor, S. L., Dec 1 2002, In : ACS Symposium Series. 829, p. 205-216 12 p.

Research output: Contribution to journalReview article

Biotechnology
123 Citations (Scopus)

A systematic approach to the development of fluorescent contrast agents for optical imaging of mouse cancer models

Kovar, J. L., Simpson, M. A., Schutz-Geschwender, A. & Olive, D. M., Aug 1 2007, In : Analytical Biochemistry. 367, 1, p. 1-12 12 p.

Research output: Contribution to journalReview article

Neoplasm Proteins
Fluorescent Dyes
Contrast Media
Membrane Proteins
Animals
32 Citations (Scopus)

A systematic review of the effect of thermal processing on the allergenicity of tree nuts

Masthoff, L. J., Hoff, R., Verhoeckx, K. C. M., Van Os-Medendorp, H., Michelsen-Huisman, A., Baumert, J. L., Pasmans, S. G., Meijer, Y. & Knulst, A. C., Aug 1 2013, In : Allergy: European Journal of Allergy and Clinical Immunology. 68, 8, p. 983-993 11 p.

Research output: Contribution to journalReview article

Nuts
Corylus
Hot Temperature
Seed Storage Proteins
Bertholletia
11 Citations (Scopus)

A technique for inducing B-cell ablation in chickens by in ovo injection of cyclophosphamide

Reynolds, D. L. & Maraqa, A. D., Jan 1 1999, In : Avian diseases. 43, 3, p. 367-375 9 p.

Research output: Contribution to journalReview article

cyclophosphamide
Cyclophosphamide
B-lymphocytes
Birds
Chickens
23 Citations (Scopus)

Attaching-effacing Escherichia coli Infections in Cattle

Moxley, R. A. & Smith, D. R., Mar 1 2010, In : Veterinary Clinics of North America - Food Animal Practice. 26, 1, p. 29-56 28 p.

Research output: Contribution to journalReview article

Enterohemorrhagic Escherichia coli
Escherichia coli Infections
enterohemorrhagic Escherichia coli
Escherichia coli
Enteropathogenic Escherichia coli
211 Citations (Scopus)

At the crossroads of bacterial metabolism and virulence factor synthesis in staphylococci

Somerville, G. A. & Proctor, R. A., Jun 1 2009, In : Microbiology and Molecular Biology Reviews. 73, 2, p. 233-248 16 p.

Research output: Contribution to journalReview article

Bacterial Gene Expression Regulation
Coenzymes
Virulence Factors
Metabolic Networks and Pathways
Staphylococcus
28 Citations (Scopus)

ATX1/AtCOMPASS and the H3K4me3 marks: How do they activate arabidopsis genes?

Fromm, M. & Avramova, Z., Oct 2014, In : Current Opinion in Plant Biology. 21, p. 75-82 8 p.

Research output: Contribution to journalReview article

Arabidopsis
histones
transcription (genetics)
nucleosomes
genes
28 Citations (Scopus)

Autocrine signaling involved in cell volume regulation: The role of released transmitters and plasma membrane receptors

Franco, R., Panayiotidis, M. I. & De La Paz, L. D. O., Jul 1 2008, In : Journal of Cellular Physiology. 216, 1, p. 14-18 5 p.

Research output: Contribution to journalReview article

Autocrine Communication
Cell membranes
Cell Size
Transmitters
Chemical activation
10 Citations (Scopus)

Autoimmunity in picornavirus infections

Massilamany, C., Koenig, A., Reddy, J., Huber, S. & Buskiewicz, I., Feb 2016, In : Current Opinion in Virology. 16, p. 8-14 7 p.

Research output: Contribution to journalReview article

Picornaviridae Infections
Enterovirus
Autoimmunity
Theilovirus
Molecular Mimicry
24 Citations (Scopus)

Autoimmunity in viral myocarditis

Reddy, J., Massilamany, C., Buskiewicz, I. & Huber, S. A., Jul 1 2013, In : Current Opinion in Rheumatology. 25, 4, p. 502-508 7 p.

Research output: Contribution to journalReview article

Myocarditis
Autoimmunity
Epitopes
Myosin Heavy Chains
Innate Immunity
86 Citations (Scopus)

Autophagy in filamentous fungi

Pollack, J. K., Harris, S. D. & Marten, M. R., Jan 1 2009, In : Fungal Genetics and Biology. 46, 1, p. 1-8 8 p.

Research output: Contribution to journalReview article

Autophagy
Fungi
Yeasts
Growth and Development
Eukaryotic Cells
275 Citations (Scopus)

Bacterial pathogens in plants: Life up against the wall

Alfano, J. R. & Collmer, A., Oct 1 1996, In : Plant Cell. 8, 10, p. 1683-1698 16 p.

Research output: Contribution to journalReview article

plant pathogens
24 Citations (Scopus)
Progeria
Innate Immunity
Genome
DNA Transposable Elements
Viral Genes
72 Citations (Scopus)

Bean pod mottle virus: A threat to U.S. soybean production

Giesler, L. J., Ghabrial, S. A., Hunt, T. E. & Hill, J. H., Dec 1 2002, In : Plant disease. 86, 12, p. 1280-1289 10 p.

Research output: Contribution to journalReview article

Open Access
Bean pod mottle virus
soybeans
36 Citations (Scopus)

Beyond the paradigm: Combining mass spectrometry and nuclear magnetic resonance for metabolomics

Marshall, D. D. & Powers, R., May 1 2017, In : Progress in Nuclear Magnetic Resonance Spectroscopy. 100, p. 1-16 16 p.

Research output: Contribution to journalReview article

Metabolomics
Mass spectrometry
Mass Spectrometry
Magnetic Resonance Spectroscopy
mass spectroscopy
102 Citations (Scopus)

Biogenesis of cytochrome c oxidase

Khalimonchuk, O. & Rödel, G., Dec 1 2005, In : Mitochondrion. 5, 6, p. 363-388 26 p.

Research output: Contribution to journalReview article

Electron Transport Complex IV
Oxidoreductases
Enzymes
Electron Transport
Mitochondria