College of Agricultural Sciences & Natural Resources

Research Output 1964 2020

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Review article
2019
1 Citation (Scopus)

Board Invited review: The pig microbiota and the potential for harnessing the power of the microbiome to improve growth and health

Aluthge, N. D., van Sambeek, D. M., Carney-Hinkle, E. E., Li, Y. S., Fernando, S. C. & Burkey, T. E., Jan 1 2019, In : Journal of animal science. 97, 9, p. 3741-3757 17 p.

Research output: Contribution to journalReview article

Open Access
Microbiota
intestinal microorganisms
Swine
microbiology
Microbiology

DNA uptake by type IV filaments

Piepenbrink, K. H., Jan 1 2019, In : Frontiers in Molecular Biosciences. 6, FEB, 00001.

Research output: Contribution to journalReview article

Open Access
DNA
Mental Competency
Micrococcus luteus
Bacterial DNA
Experiments
1 Citation (Scopus)

Essential, deadly, enigmatic: Polyamine metabolism and roles in fungal cells

Rocha, R. O. & Wilson, R. A., Jan 2019, In : Fungal Biology Reviews. 33, 1, p. 47-57 11 p.

Research output: Contribution to journalReview article

Polyamines
Fungi
Growth
Cell Cycle
Homeostasis
1 Citation (Scopus)

Genome to phenome: Improving animal health, production, and well-being - A new USDA blueprint for animal genome research 2018-2027

Agricultural Animal Genomics Community, Jan 1 2019, In : Frontiers in Genetics. 10, MAY, 327.

Research output: Contribution to journalReview article

Open Access
United States Department of Agriculture
Genome
Genomics
Health
Research

Host factors against plant viruses

Garcia-Ruiz, H., Nov 1 2019, In : Molecular Plant Pathology. 20, 11, p. 1588-1601 14 p.

Research output: Contribution to journalReview article

Open Access
Plant Viruses
plant viruses
Antiviral Agents
virus
Virus Diseases
4 Citations (Scopus)

Milk-Derived Exosomes and Metabolic Regulation

Zempleni, J., Sukreet, S., Zhou, F., Wu, D. & Mutai, E., Feb 15 2019, In : Annual Review of Animal Biosciences. 7, p. 245-262 18 p.

Research output: Contribution to journalReview article

exosomes
Exosomes
Milk
milk
MicroRNAs
2 Citations (Scopus)

Moving Forward with Molecular Communication: From Theory to Human Health Applications

Akyildiz, I. F., Pierobon, M. & Balasubramaniam, S., May 2019, In : Proceedings of the IEEE. 107, 5, p. 858-865 8 p., 8710366.

Research output: Contribution to journalReview article

Communication systems
Health
Communication
3 Citations (Scopus)

Obesity induces ovarian inflammation and reduces oocyte quality

Snider, A. P. & Wood, J. R., Jan 1 2019, In : Reproduction. 158, 3, p. R79-R90

Research output: Contribution to journalReview article

Open Access
Oocytes
Obesity
Inflammation
Oxidative Stress
Polycystic Ovary Syndrome

Postnatal Nutrient Repartitioning due to Adaptive Developmental Programming

Posont, R. J. & Yates, D. T., Jul 2019, In : Veterinary Clinics of North America - Food Animal Practice. 35, 2, p. 277-288 12 p.

Research output: Contribution to journalReview article

low birth weight
livestock
Food
nutrients
nutrient utilization

Proteolytic regulation of mitochondrial dynamics

Dietz, J. V., Bohovych, I., Viana, M. P. & Khalimonchuk, O., Nov 2019, In : Mitochondrion. 49, p. 289-304 16 p.

Research output: Contribution to journalReview article

Mitochondrial Dynamics
Mitochondrial Membranes
Dynamins
Physiological Stress
Guanosine

Redox Regulation of the Mitochondrial Quality Control Protease Oma1

Bohovych, I., Dietz, J. V., Swenson, S., Zahayko, N. & Khalimonchuk, O., Aug 20 2019, In : Antioxidants and Redox Signaling. 31, 6, p. 429-443 15 p.

Research output: Contribution to journalReview article

Quality Control
Oxidation-Reduction
Quality control
Peptide Hydrolases
Disulfides
4 Citations (Scopus)

Role of proline in pathogen and host interactions

Christgen, S. L. & Becker, D. F., Jan 1 2019, In : Antioxidants and Redox Signaling. 30, 4, p. 683-709 27 p.

Research output: Contribution to journalReview article

Host-Pathogen Interactions
Pathogens
Proline
Metabolism
Infection
3 Citations (Scopus)

Structural-features of food-derived bioactive peptides with anti-inflammatory activity: A brief review

Guha, S. & Majumder, K., Jan 2019, In : Journal of Food Biochemistry. 43, 1, e12531.

Research output: Contribution to journalReview article

anti-inflammatory activity
Anti-Inflammatory Agents
peptides
Food
Peptides

Ten years of the horse reference genome: insights into equine biology, domestication and population dynamics in the post-genome era

Raudsepp, T., Finno, C. J., Bellone, R. R. & Petersen, J. L., Dec 1 2019, In : Animal genetics. 50, 6, p. 569-597 29 p.

Research output: Contribution to journalReview article

Open Access
Population Dynamics
domestication
Horses
population dynamics
Genome
2 Citations (Scopus)

The M-band: The underestimated part of the sarcomere

Lange, S., Pinotsis, N., Agarkova, I. & Ehler, E., Jan 1 2019, In : Biochimica et Biophysica Acta - Molecular Cell Research.

Research output: Contribution to journalReview article

Open Access
Sarcomeres
Muscles
Connectin
Muscle Contraction
Serum Response Factor

The role of isothiocyanates as cancer chemo-preventive, chemo-therapeutic and anti-melanoma agents

Mitsiogianni, M., Koutsidis, G., Mavroudis, N., Trafalis, D. T., Botaitis, S., Franco, R., Zoumpourlis, V., Amery, T., Galanis, A., Pappa, A. & Panayiotidis, M. I., Apr 2019, In : Antioxidants. 8, 4, 106.

Research output: Contribution to journalReview article

Open Access
Isothiocyanates
Melanoma
Vegetables
Neoplasms
Sulfur Compounds
2018
6 Citations (Scopus)
animal reproduction
Reproduction
ewes
Hot Temperature
metabolic diseases
Salmonella
beef
anti-infective agents
antibiotics
Escherichia coli
16 Citations (Scopus)

Complementary effects of cereal and pulse polyphenols and dietary fiber on chronic inflammation and gut health

Awika, J. M., Rose, D. J. & Simsek, S., Mar 2018, In : Food and Function. 9, 3, p. 1389-1409 21 p.

Research output: Contribution to journalReview article

Dietary Fiber
Polyphenols
polyphenols
dietary fiber
legumes
3 Citations (Scopus)

Environmental Food Exposure: What Is the Risk of Clinical Reactivity From Cross-Contact and What Is the Risk of Sensitization

Sheehan, W. J., Taylor, S. L., Phipatanakul, W. & Brough, H. A., Nov 1 2018, In : Journal of Allergy and Clinical Immunology: In Practice. 6, 6, p. 1825-1832 8 p.

Research output: Contribution to journalReview article

Environmental Exposure
Food
Proteins
Allergens
Eating
2 Citations (Scopus)

Existing and Potential Statistical and Computational Approaches for the Analysis of 3D CT Images of Plant Roots

Xu, Z., Valdes, C. & Clarke, J., Jan 1 2018, In : Agronomy. 8, 5, 71.

Research output: Contribution to journalReview article

computed tomography
X-radiation
root systems
phenotype
nanotechnology
17 Citations (Scopus)

Fermented foods as a dietary source of live organisms

Rezac, S., Kok, C. R., Heermann, M. & Hutkins, R., Aug 24 2018, In : Frontiers in Microbiology. 9, AUG, 1785.

Research output: Contribution to journalReview article

Food
Lactic Acid
Insurance Benefits
Bacteria
Cultured Milk Products
18 Citations (Scopus)

Food-derived bioactive peptides in human health: Challenges and opportunities

Chakrabarti, S., Guha, S. & Majumder, K., Nov 12 2018, In : Nutrients. 10, 11, 1738.

Research output: Contribution to journalReview article

human health
peptides
Food
Peptides
Health
7 Citations (Scopus)

From chemo-prevention to epigenetic regulation: The role of isothiocyanates in skin cancer prevention

Mitsiogianni, M., Amery, T., Franco-Cruz, R., Zoumpourlis, V., Pappa, A. & Panayiotidis, M. I., Oct 2018, In : Pharmacology and Therapeutics. 190, p. 187-201 15 p.

Research output: Contribution to journalReview article

Isothiocyanates
Skin Neoplasms
Epigenomics
Vegetables
Melanoma
3 Citations (Scopus)
Lipids
Neoplasms
Obesity
Unsaturated Fatty Acids
Inflammation
2 Citations (Scopus)

Impact of nutrient overload on metabolic homeostasis

Qiu, H. & Schlegel, V., Jan 1 2018, In : Nutrition Reviews. 76, 9, p. 693-707 15 p.

Research output: Contribution to journalReview article

Homeostasis
Food
Overnutrition
Organelles
Energy Metabolism
3 Citations (Scopus)

Innovations in improving lipid production: Algal chemical genetics

Wase, N., Black, P. N. & DiRusso, C. C., Jul 2018, In : Progress in Lipid Research. 71, p. 101-123 23 p.

Research output: Contribution to journalReview article

Innovation
Lipids
Triglycerides
Algae
Lipid Metabolism
3 Citations (Scopus)

mTOR/AMPK signaling in the brain: Cell metabolism, proteostasis and survival

Garza-Lombó, C., Schroder, A., Reyes-Reyes, E. M. & Franco-Cruz, R., Apr 2018, In : Current Opinion in Toxicology. 8, p. 102-110 9 p.

Research output: Contribution to journalReview article

Sirolimus
Adenosine Monophosphate
Metabolism
Protein Kinases
Brain
16 Citations (Scopus)

Neurotoxicity Linked to Dysfunctional Metal Ion Homeostasis and Xenobiotic Metal Exposure: Redox Signaling and Oxidative Stress

Garza-Lombó, C., Posadas, Y., Quintanar, L., Gonsebatt, M. E. & Franco-Cruz, R., Jun 20 2018, In : Antioxidants and Redox Signaling. 28, 18, p. 1669-1703 35 p.

Research output: Contribution to journalReview article

Oxidative stress
Xenobiotics
Oxidation-Reduction
Metal ions
Oxidative Stress
4 Citations (Scopus)

Oral non-viral gene delivery for applications in DNA vaccination and gene therapy

Farris, E., Heck, K., Lampe, A. T., Brown, D. M., Ramer-Tait, A. E. & Pannier, A. K., Sep 2018, In : Current Opinion in Biomedical Engineering. 7, p. 51-57 7 p.

Research output: Contribution to journalReview article

Open Access
Gene therapy
Genetic Therapy
Vaccination
DNA
Genes
13 Citations (Scopus)

Probiotics for human use

Sanders, M. E., Merenstein, D., Merrifield, C. A. & Hutkins, R., Sep 2018, In : Nutrition Bulletin. 43, 3, p. 212-225 14 p.

Research output: Contribution to journalReview article

Probiotics
Health
Insurance Benefits
Health Personnel
Communication

Profile of genetically modified plants authorized in Mexico

Garcia Ruiz, M. T., Knapp, A. N. & Garcia Ruiz, H., Jul 3 2018, In : GM Crops and Food. 9, 3, p. 152-168 17 p.

Research output: Contribution to journalReview article

Genetically Modified Plants
Mexico
Zea mays
center of origin
biosafety
9 Citations (Scopus)

Quantifying changes in spore-forming bacteria contamination along the milk production chain from farm to packaged pasteurized milk using systematic review and meta-analysis

Ortuzar, J., Martinez, B., Bianchini, A., Stratton, J., Rupnow, J. & Wang, B., Apr 2018, In : Food Control. 86, p. 319-331 13 p.

Research output: Contribution to journalReview article

spore-forming bacteria
pasteurized milk
systematic review
Spores
meta-analysis
24 Citations (Scopus)

Reactive oxygen species in chronic obstructive pulmonary disease

Boukhenouna, S., Wilson, M. A., Bahmed, K. & Kosmider, B., Jan 1 2018, In : Oxidative medicine and cellular longevity. 2018, 5730395.

Research output: Contribution to journalReview article

Pulmonary diseases
Chronic Obstructive Pulmonary Disease
Reactive Oxygen Species
Tobacco Products
Disease Progression
19 Citations (Scopus)

Reactive oxygen species metabolism and plant-fungal interactions

Segal, L. M. & Wilson, R. A., Jan 2018, In : Fungal Genetics and Biology. 110, p. 1-9 9 p.

Research output: Contribution to journalReview article

Reactive Oxygen Species
Plant Cells
Infection
Life Style
Decision Making
4 Citations (Scopus)

Redox Biology in Neurological Function, Dysfunction, and Aging

Franco-Cruz, R. & Vargas, M. R., Jun 20 2018, In : Antioxidants and Redox Signaling. 28, 18, p. 1583-1586 4 p.

Research output: Contribution to journalReview article

Oxidation-Reduction
Aging of materials
Redox reactions
Oxidation
Homeostasis
33 Citations (Scopus)

Shared mechanisms among probiotic taxa: implications for general probiotic claims

Sanders, M. E., Benson, A., Lebeer, S., Merenstein, D. J. & Klaenhammer, T. R., Feb 2018, In : Current Opinion in Biotechnology. 49, p. 207-216 10 p.

Research output: Contribution to journalReview article

Probiotics
Insurance Benefits
Health
4 Citations (Scopus)

Susceptibility genes to plant viruses

Garcia Ruiz, H., Sep 10 2018, In : Viruses. 10, 9, 484.

Research output: Contribution to journalReview article

Plant Viruses
Viruses
Virus Diseases
Virus Replication
Genes
7 Citations (Scopus)

Synbiotics for Improved Human Health: Recent Developments, Challenges, and Opportunities

Krumbeck, J. A., Walter, J. & Hutkins, R. W., Mar 25 2018, In : Annual Review of Food Science and Technology. 9, p. 451-479 29 p.

Research output: Contribution to journalReview article

Synbiotics
human health
dietary supplements
Health
Prebiotics

The gut microbiome of nonhuman primates: Lessons in ecology and evolution

Clayton, J. B., Gomez, A., Amato, K., Knights, D., Travis, D. A., Blekhman, R., Knight, R., Leigh, S., Stumpf, R., Wolf, T., Glander, K. E., Cabana, F. & Johnson, T. J., Jun 2018, In : American Journal of Primatology. 80, 6, e22867.

Research output: Contribution to journalReview article

primate
Primates
digestive system
ecology
human health
2 Citations (Scopus)

The pathogenicity of Aspergillus fumigatus, drug resistance, and nanoparticle delivery

Szalewski, D. A., Hinrichs, V. S., Zinniel, D. K. & Barletta, R. G., Jan 1 2018, In : Canadian journal of microbiology. 64, 7, p. 439-453 15 p.

Research output: Contribution to journalReview article

Aspergillus fumigatus
Drug Resistance
Nanoparticles
Virulence
Aspergillus
2017
176 Citations (Scopus)

A critical assessment of the "sterile womb" and "in utero colonization" hypotheses: Implications for research on the pioneer infant microbiome

Perez-Muñoz, M. E., Arrieta, M. C., Ramer-Tait, A. E. & Walter, J., Jan 1 2017, In : Microbiome. 5, 1, 48.

Research output: Contribution to journalReview article

Microbiota
Germ-Free Life
Research
Placenta
Parturition
33 Citations (Scopus)

Beyond the paradigm: Combining mass spectrometry and nuclear magnetic resonance for metabolomics

Marshall, D. D. & Powers, R., May 1 2017, In : Progress in Nuclear Magnetic Resonance Spectroscopy. 100, p. 1-16 16 p.

Research output: Contribution to journalReview article

Metabolomics
Mass spectrometry
Mass Spectrometry
Magnetic Resonance Spectroscopy
mass spectroscopy
22 Citations (Scopus)

Cell Biology of Hyphal Growth

Steinberg, G., Peñalva, M. A., Riquelme, M., Wösten, H. A. & Harris, S. D., Apr 1 2017, In : Microbiology Spectrum. 5, 2

Research output: Contribution to journalReview article

Cell Biology
Hyphae
Fungi
fungus
Growth
6 Citations (Scopus)

Chloroviruses have a sweet tooth

Van Etten, J. L., Agarkova, I., Dunigan, D. D., Tonetti, M., De Castro, C. & Duncan, G. A., Apr 22 2017, In : Viruses. 9, 4, p. 1-23 23 p., 88.

Research output: Contribution to journalReview article

Polysaccharides
Viruses
4 alpha-glucanotransferase
Guanosine Diphosphate Fucose
Chlorella
8 Citations (Scopus)

Coccolithoviruses: A review of cross‐kingdom genomic thievery and metabolic thuggery

Nissimov, J. I., Pagarete, A., Ma, F., Cody, S., Dunigan, D. D., Kimmance, S. A. & Allen, M. J., Mar 18 2017, In : Viruses. 9, 3, 52.

Research output: Contribution to journalReview article

Haptophyta
Genome
Genes
Phycodnaviridae
Viruses
15 Citations (Scopus)

Conventional and unconventional ubiquitination in plant immunity

Zhou, B. & Zeng, L., Dec 2017, In : Molecular Plant Pathology. 18, 9, p. 1313-1330 18 p.

Research output: Contribution to journalReview article

Plant Immunity
Ubiquitination
immunity
ubiquitin-protein ligase
Ubiquitin-Protein Ligases
25 Citations (Scopus)

Deciphering interactions between the gut microbiota and the immune system via microbial cultivation and minimal microbiomes

Clavel, T., Gomes-Neto, J. C., Lagkouvardos, I. & Ramer-Tait, A. E., Sep 2017, In : Immunological Reviews. 279, 1, p. 8-22 15 p.

Research output: Contribution to journalReview article

Microbiota
Immune System
Immunity
Manuscripts
Ecosystem
35 Citations (Scopus)

Emerging roles for microRNAs in diabetic microvascular disease: Novel targets for therapy

Zhang, Y., Sun, X., Icli, B. & Feinberg, M. W., Jan 1 2017, In : Endocrine reviews. 38, 2, p. 145-168 24 p.

Research output: Contribution to journalReview article

MicroRNAs
Diabetes Complications
Microvessels
Type 2 Diabetes Mellitus
Insulin Resistance
458 Citations (Scopus)

Expert consensus document: The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of prebiotics

Gibson, G. R., Hutkins, R., Sanders, M. E., Prescott, S. L., Reimer, R. A., Salminen, S. J., Scott, K., Stanton, C., Swanson, K. S., Cani, P. D., Verbeke, K. & Reid, G., Aug 1 2017, In : Nature Reviews Gastroenterology and Hepatology. 14, 8, p. 491-502 12 p.

Research output: Contribution to journalReview article

Prebiotics
Probiotics
Microbiota
Insurance Benefits
Health