College of Agricultural Sciences & Natural Resources

Research Output 1964 2019

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Review article
2019

DNA uptake by type IV filaments

Piepenbrink, K. H., Jan 1 2019, In : Frontiers in Molecular Biosciences. 6, FEB, 00001.

Research output: Contribution to journalReview article

Open Access
DNA
Mental Competency
Micrococcus luteus
Bacterial DNA
Experiments
3 Citations (Scopus)

Milk-Derived Exosomes and Metabolic Regulation

Zempleni, J., Sukreet, S., Zhou, F., Wu, D. & Mutai, E., Feb 15 2019, In : Annual Review of Animal Biosciences. 7, p. 245-262 18 p.

Research output: Contribution to journalReview article

exosomes
Exosomes
Milk
milk
MicroRNAs

Moving Forward with Molecular Communication: From Theory to Human Health Applications

Akyildiz, I. F., Pierobon, M. & Balasubramaniam, S., May 1 2019, In : Proceedings of the IEEE. 107, 5, p. 858-865 8 p., 8710366.

Research output: Contribution to journalReview article

Communication systems
Health
Communication

Postnatal Nutrient Repartitioning due to Adaptive Developmental Programming

Posont, R. J. & Yates, D. T., Jul 1 2019, In : Veterinary Clinics of North America - Food Animal Practice. 35, 2, p. 277-288 12 p.

Research output: Contribution to journalReview article

low birth weight
livestock
Food
nutrients
nutrient utilization

Proteolytic regulation of mitochondrial dynamics

Dietz, J. V., Bohovych, I., Viana, M. P. & Khalimonchuk, O., Jan 1 2019, In : Mitochondrion.

Research output: Contribution to journalReview article

Mitochondrial Dynamics
Mitochondrial Membranes
Dynamins
Physiological Stress
Guanosine

Redox Regulation of the Mitochondrial Quality Control Protease Oma1

Bohovych, I., Dietz, J. V., Swenson, S., Zahayko, N. & Khalimonchuk, O., Aug 20 2019, In : Antioxidants and Redox Signaling. 31, 6, p. 429-443 15 p.

Research output: Contribution to journalReview article

Quality Control
Oxidation-Reduction
Quality control
Peptide Hydrolases
Disulfides
4 Citations (Scopus)

Role of proline in pathogen and host interactions

Christgen, S. L. & Becker, D. F., Jan 1 2019, In : Antioxidants and Redox Signaling. 30, 4, p. 683-709 27 p.

Research output: Contribution to journalReview article

Host-Pathogen Interactions
Pathogens
Proline
Metabolism
Infection
2018
3 Citations (Scopus)
animal reproduction
Reproduction
ewes
Hot Temperature
metabolic diseases
Salmonella
beef
anti-infective agents
antibiotics
Escherichia coli
11 Citations (Scopus)

Complementary effects of cereal and pulse polyphenols and dietary fiber on chronic inflammation and gut health

Awika, J. M., Rose, D. J. & Simsek, S., Mar 1 2018, In : Food and Function. 9, 3, p. 1389-1409 21 p.

Research output: Contribution to journalReview article

Dietary Fiber
Polyphenols
polyphenols
dietary fiber
legumes
2 Citations (Scopus)

Environmental Food Exposure: What Is the Risk of Clinical Reactivity From Cross-Contact and What Is the Risk of Sensitization

Sheehan, W. J., Taylor, S. L., Phipatanakul, W. & Brough, H. A., Nov 1 2018, In : Journal of Allergy and Clinical Immunology: In Practice. 6, 6, p. 1825-1832 8 p.

Research output: Contribution to journalReview article

Environmental Exposure
Food
Proteins
Allergens
Eating
1 Citation (Scopus)

Existing and Potential Statistical and Computational Approaches for the Analysis of 3D CT Images of Plant Roots

Xu, Z., Valdes, C. & Clarke, J. L., Jan 1 2018, In : Agronomy. 8, 5, 71.

Research output: Contribution to journalReview article

computed tomography
X-radiation
root systems
phenotype
nanotechnology
14 Citations (Scopus)

Fermented foods as a dietary source of live organisms

Rezac, S., Kok, C. R., Heermann, M. & Hutkins, R. W., Aug 24 2018, In : Frontiers in Microbiology. 9, AUG, 1785.

Research output: Contribution to journalReview article

Food
Lactic Acid
Insurance Benefits
Bacteria
Cultured Milk Products
5 Citations (Scopus)

Food-Derived Bioactive Peptides in Human Health: Challenges and Opportunities

Chakrabarti, S., Guha, S. & Majumder, K., Nov 12 2018, In : Nutrients. 10, 11

Research output: Contribution to journalReview article

human health
peptides
Food
Peptides
Health
3 Citations (Scopus)
Lipids
Neoplasms
Obesity
Unsaturated Fatty Acids
Inflammation
1 Citation (Scopus)

Impact of nutrient overload on metabolic homeostasis

Qiu, H. & Schlegel, V. L., Jan 1 2018, In : Nutrition Reviews. 76, 9, p. 693-707 15 p.

Research output: Contribution to journalReview article

Homeostasis
Food
Overnutrition
Organelles
Energy Metabolism
2 Citations (Scopus)

Innovations in improving lipid production: Algal chemical genetics

Wase, N., Black, P. N. & DiRusso, C. C., Jul 1 2018, In : Progress in Lipid Research. 71, p. 101-123 23 p.

Research output: Contribution to journalReview article

Innovation
Lipids
Triglycerides
Algae
Lipid Metabolism
3 Citations (Scopus)

mTOR/AMPK signaling in the brain: Cell metabolism, proteostasis and survival

Garza-Lombó, C., Schroder, A., Reyes-Reyes, E. M. & Franco-Cruz, R., Apr 1 2018, In : Current Opinion in Toxicology. 8, p. 102-110 9 p.

Research output: Contribution to journalReview article

Sirolimus
Adenosine Monophosphate
Metabolism
Protein Kinases
Brain
12 Citations (Scopus)

Neurotoxicity Linked to Dysfunctional Metal Ion Homeostasis and Xenobiotic Metal Exposure: Redox Signaling and Oxidative Stress

Garza-Lombó, C., Posadas, Y., Quintanar, L., Gonsebatt, M. E. & Franco-Cruz, R., Jun 20 2018, In : Antioxidants and Redox Signaling. 28, 18, p. 1669-1703 35 p.

Research output: Contribution to journalReview article

Oxidative stress
Xenobiotics
Oxidation-Reduction
Metal ions
Oxidative Stress
7 Citations (Scopus)

Probiotics for human use

Sanders, M. E., Merenstein, D., Merrifield, C. A. & Hutkins, R. W., Sep 1 2018, In : Nutrition Bulletin. 43, 3, p. 212-225 14 p.

Research output: Contribution to journalReview article

Probiotics
Health
Insurance Benefits
Health Personnel
Communication

Profile of genetically modified plants authorized in Mexico

Garcia Ruiz, M. T., Knapp, A. N. & Garcia Ruiz, H., Jul 3 2018, In : GM Crops and Food. 9, 3, p. 152-168 17 p.

Research output: Contribution to journalReview article

Genetically Modified Plants
Mexico
Zea mays
center of origin
biosafety
7 Citations (Scopus)

Quantifying changes in spore-forming bacteria contamination along the milk production chain from farm to packaged pasteurized milk using systematic review and meta-analysis

Ortuzar, J., Martinez, B., Bianchini, A., Stratton, J., Rupnow, J. & Wang, B., Apr 1 2018, In : Food Control. 86, p. 319-331 13 p.

Research output: Contribution to journalReview article

spore-forming bacteria
pasteurized milk
systematic review
Spores
meta-analysis
19 Citations (Scopus)

Reactive oxygen species in chronic obstructive pulmonary disease

Boukhenouna, S., Wilson, M. A., Bahmed, K. & Kosmider, B., Jan 1 2018, In : Oxidative medicine and cellular longevity. 2018, 5730395.

Research output: Contribution to journalReview article

Pulmonary diseases
Chronic Obstructive Pulmonary Disease
Reactive Oxygen Species
Tobacco Products
Disease Progression
13 Citations (Scopus)

Reactive oxygen species metabolism and plant-fungal interactions

Segal, L. M. & Wilson, R. A., Jan 1 2018, In : Fungal Genetics and Biology. 110, p. 1-9 9 p.

Research output: Contribution to journalReview article

Reactive Oxygen Species
Plant Cells
Infection
Life Style
Decision Making
3 Citations (Scopus)

Redox Biology in Neurological Function, Dysfunction, and Aging

Franco-Cruz, R. & Vargas, M. R., Jun 20 2018, In : Antioxidants and Redox Signaling. 28, 18, p. 1583-1586 4 p.

Research output: Contribution to journalReview article

Oxidation-Reduction
Aging of materials
Redox reactions
Oxidation
Homeostasis
26 Citations (Scopus)

Shared mechanisms among probiotic taxa: implications for general probiotic claims

Sanders, M. E., Benson, A. K., Lebeer, S., Merenstein, D. J. & Klaenhammer, T. R., Feb 1 2018, In : Current Opinion in Biotechnology. 49, p. 207-216 10 p.

Research output: Contribution to journalReview article

Probiotics
Insurance Benefits
Health
1 Citation (Scopus)

Susceptibility genes to plant viruses

Garcia Ruiz, H., Sep 10 2018, In : Viruses. 10, 9, 484.

Research output: Contribution to journalReview article

Plant Viruses
Viruses
Virus Diseases
Virus Replication
Genes
4 Citations (Scopus)

Synbiotics for Improved Human Health: Recent Developments, Challenges, and Opportunities

Krumbeck, J. A., Walter, J. & Hutkins, R. W., Mar 25 2018, In : Annual review of food science and technology. 9, p. 451-479 29 p.

Research output: Contribution to journalReview article

Synbiotics
human health
dietary supplements
Health
Prebiotics
1 Citation (Scopus)

The pathogenicity of Aspergillus fumigatus, drug resistance, and nanoparticle delivery

Szalewski, D. A., Hinrichs, V. S., Zinniel, D. K. & Barletta, R. G., Jan 1 2018, In : Canadian Journal of Microbiology. 64, 7, p. 439-453 15 p.

Research output: Contribution to journalReview article

Aspergillus fumigatus
Drug Resistance
Nanoparticles
Virulence
Aspergillus
2017
156 Citations (Scopus)

A critical assessment of the "sterile womb" and "in utero colonization" hypotheses: implications for research on the pioneer infant microbiome

Perez-Muñoz, M. E., Arrieta, M. C., Ramer-Tait, A. & Walter, J., Apr 28 2017, In : Microbiome. 5, 1, p. 48 1 p.

Research output: Contribution to journalReview article

Microbiota
Germ-Free Life
Research
Placenta
Parturition
29 Citations (Scopus)

Beyond the paradigm: Combining mass spectrometry and nuclear magnetic resonance for metabolomics

Marshall, D. D. & Powers, R., May 1 2017, In : Progress in Nuclear Magnetic Resonance Spectroscopy. 100, p. 1-16 16 p.

Research output: Contribution to journalReview article

Metabolomics
Mass spectrometry
Mass Spectrometry
Magnetic Resonance Spectroscopy
mass spectroscopy
19 Citations (Scopus)

Cell Biology of Hyphal Growth

Steinberg, G., Peñalva, M. A., Riquelme, M., Wösten, H. A. & Harris, S. D., Apr 1 2017, In : Microbiology spectrum. 5, 2

Research output: Contribution to journalReview article

Cell Biology
Hyphae
Fungi
fungus
Growth
6 Citations (Scopus)

Chloroviruses have a sweet tooth

Van Etten, J. L., Agarkova, I. V., Dunigan, D. D., Tonetti, M., De Castro, C. & Duncan, G. A., Apr 22 2017, In : Viruses. 9, 4, p. 1-23 23 p., 88.

Research output: Contribution to journalReview article

Polysaccharides
Viruses
4 alpha-glucanotransferase
Guanosine Diphosphate Fucose
Chlorella
8 Citations (Scopus)

Coccolithoviruses: A review of cross‐kingdom genomic thievery and metabolic thuggery

Nissimov, J. I., Pagarete, A., Ma, F., Cody, S., Dunigan, D. D., Kimmance, S. A. & Allen, M. J., Mar 18 2017, In : Viruses. 9, 3, 52.

Research output: Contribution to journalReview article

Haptophyta
Genome
Genes
Phycodnaviridae
Viruses
18 Citations (Scopus)

Deciphering interactions between the gut microbiota and the immune system via microbial cultivation and minimal microbiomes

Clavel, T., Gomes-Neto, J. C., Lagkouvardos, I. & Ramer-Tait, A., Sep 1 2017, In : Immunological Reviews. 279, 1, p. 8-22 15 p.

Research output: Contribution to journalReview article

Microbiota
Immune System
Immunity
Manuscripts
Ecosystem
30 Citations (Scopus)

Emerging roles for microRNAs in diabetic microvascular disease: Novel targets for therapy

Zhang, Y., Sun, X., Icli, B. & Feinberg, M. W., 2017, In : Endocrine Reviews. 2017, 1, p. 1-22 22 p.

Research output: Contribution to journalReview article

MicroRNAs
Diabetes Complications
Microvessels
Type 2 Diabetes Mellitus
Insulin Resistance
8 Citations (Scopus)

Expression and role of gonadotropin-releasing hormone 2 and its receptor in mammals

Desaulniers, A. T., Cederberg, R. A., Lents, C. A. & White, B. R., Dec 11 2017, In : Frontiers in Endocrinology. 8, DEC, 269.

Research output: Contribution to journalReview article

Gonadotropin-Releasing Hormone
Mammals
Gonadotropins
Swine
Genes
134 Citations (Scopus)

Health benefits of fermented foods: microbiota and beyond

Marco, M. L., Heeney, D., Binda, S., Cifelli, C. J., Cotter, P. D., Foligné, B., Gänzle, M., Kort, R., Pasin, G., Pihlanto, A., Smid, E. J. & Hutkins, R. W., Apr 1 2017, In : Current Opinion in Biotechnology. 44, p. 94-102 9 p.

Research output: Contribution to journalReview article

Microbiota
Insurance Benefits
Health
Food
Processed foods
2 Citations (Scopus)

Insights regarding fungal phosphoproteomic analysis

Ribeiro, L. F. C., Chelius, C. L., Harris, S. D. & Marten, M. R., Jul 1 2017, In : Fungal Genetics and Biology. 104, p. 38-44 7 p.

Research output: Contribution to journalReview article

Phosphotransferases
Mass Spectrometry
Fungi
Phosphorylation
Technology
9 Citations (Scopus)

Metabolic investigations of the molecular mechanisms associated with Parkinson’s disease

Powers, R., Lei, S., Anandhan, A., Marshall, D. D., Worley, B., Cerny, R., Dodds, E. D., Huang, Y., Panayiotidis, M. I., Pappa, A. & Franco-Cruz, R., Jun 1 2017, In : Metabolites. 7, 2, 22.

Research output: Contribution to journalReview article

Paraquat
Synucleins
Parkinson Disease
Pentoses
Glucose
17 Citations (Scopus)

New frontiers in metabolomics: From measurement to insight

Powers, R. & Riekeberg, E., 2017, In : F1000Research. 6, 1148.

Research output: Contribution to journalReview article

Metabolomics
Precision Medicine
Systems Biology
Biomarkers
Medicine
25 Citations (Scopus)

Nutrition, microRNAs, and human health

Cui, J., Zhou, B., Ross, S. A. & Zempleni, J., 2017, In : Advances in Nutrition. 8, 1, p. 105-112 8 p.

Research output: Contribution to journalReview article

MicroRNAs
microRNA
human health
nutrition
Health
10 Citations (Scopus)

Pathogenesis, molecular genetics, and genomics of Mycobacterium avium subsp. paratuberculosis, the etiologic agent of Johne's disease

Rathnaiah, G., Zinniel, D. K., Bannantine, J. P., Stabel, J. R., Gröhn, Y. T., Collins, M. T. & Barletta, R. G., Nov 6 2017, In : Frontiers in Veterinary Science. 4, NOV, 187.

Research output: Contribution to journalReview article

Paratuberculosis
Mycobacterium avium
Mycobacterium avium subsp. paratuberculosis
paratuberculosis
Genomics
11 Citations (Scopus)

SECs (Sinusoidal Endothelial Cells), Liver Microenvironment, and Fibrosis

Natarajan, V., Harris, E. N. & Kidambi, S. S., 2017, In : BioMed Research International. 2017, 4097205.

Research output: Contribution to journalReview article

Cellular Microenvironment
Endothelial cells
Liver Cirrhosis
Liver
Endothelial Cells
179 Citations (Scopus)

The future of NMR-based metabolomics

Markley, J. L., Brüschweiler, R., Edison, A. S., Eghbalnia, H. R., Powers, R., Raftery, D. & Wishart, D. S., Feb 1 2017, In : Current Opinion in Biotechnology. 43, p. 34-40 7 p.

Research output: Contribution to journalReview article

Metabolomics
Magnetic Resonance Spectroscopy
Nuclear magnetic resonance
Mass spectrometry
Nuclear magnetic resonance spectroscopy
44 Citations (Scopus)

The host microbiome regulates and maintains human health: A primer and perspective for non-microbiologists

Thomas, S., Izard, J., Walsh, E., Batich, K., Chongsathidkiet, P., Clarke, G., Sela, D. A., Muller, A. J., Mullin, J. M., Albert, K., Gilligan, J. P., DiGuilio, K., Dilbarova, R., Alexander, W. & Prendergast, G. C., Apr 15 2017, In : Cancer research. 77, 8, p. 1783-1812 30 p.

Research output: Contribution to journalReview article

Microbiota
Immune System
Health
Adaptive Immunity
Inflammatory Bowel Diseases
22 Citations (Scopus)

The role of interactions of long non-coding RNAs and heterogeneous nuclear ribonucleoproteins in regulating cellular functions

Sun, X., Haider Ali, M. S. S. & Moran, M., Sep 1 2017, In : Biochemical Journal. 474, 17, p. 2925-2935 11 p.

Research output: Contribution to journalReview article

Long Noncoding RNA
Heterogeneous-Nuclear Ribonucleoproteins
Biological Phenomena
RNA-Binding Proteins
DNA
2016
6 Citations (Scopus)

A Review on the Potential Human Health Benefits of the Black Walnut: A Comparison with the English Walnuts and Other Tree Nuts

Câmara, C. R. S. & Schlegel, V. L., Oct 2 2016, In : International Journal of Food Properties. 19, 10, p. 2175-2189 15 p.

Research output: Contribution to journalReview article

Juglans
Juglans nigra
Juglans regia
Nuts
Insurance Benefits
7 Citations (Scopus)

Cranberries and cancer: An update of preclinical studies evaluating the cancer inhibitory potential of cranberry and cranberry derived constituents

Weh, K. M., Clarke, J. L. & Kresty, L. A., Sep 1 2016, In : Antioxidants. 5, 3, 27.

Research output: Contribution to journalReview article

Vaccinium macrocarpon
Signal transduction
Reactive Oxygen Species
Health
Apoptosis
11 Citations (Scopus)

Effects of hyperthermia as a mitigation strategy in DNA damage-based cancer therapies

Mantso, T., Goussetis, G., Franco-Cruz, R., Botaitis, S., Pappa, A. & Panayiotidis, M., Jun 1 2016, In : Seminars in Cancer Biology. 37-38, p. 96-105 10 p.

Research output: Contribution to journalReview article

DNA Damage
Fever
Neoplasms
DNA Repair
Hot Temperature