College of Agricultural Sciences & Natural Resources

Research Output

2020

Aldehyde dehydrogenase 3A1 confers oxidative stress resistance accompanied by altered DNA damage response in human corneal epithelial cells

Voulgaridou, G. P., Tsochantaridis, I., Tolkas, C., Franco, R., Giatromanolaki, A., Panayiotidis, M. I. & Pappa, A., Apr 2020, In : Free Radical Biology and Medicine. 150, p. 66-74 9 p.

Research output: Contribution to journalArticle

Allyl isothiocyanate regulates lysine acetylation and methylation marks in an experimental model of malignant melanoma

Mitsiogianni, M., Mantso, T., Trafalis, D. T., Vasantha Rupasinghe, H. P., Zoumpourlis, V., Franco, R., Botaitis, S., Pappa, A. & Panayiotidis, M. I., Mar 1 2020, In : European Journal of Nutrition. 59, 2, p. 557-569 13 p.

Research output: Contribution to journalArticle

1 Scopus citations

An evidence for surface expression of an immunogenic epitope of sarcoplasmic/endoplasmic reticulum calcium-ATPase2a on antigen-presenting cells from naive mice in the mediation of autoimmune myocarditis

Arumugam, R., Yalaka, B., Massilamany, C., Haider Ali, M. S. S., Lasrado, N., Jayaraja, S., Riethoven, J. J., Sun, X. & Reddy, J., Mar 2020, In : Immunobiology. 225, 2, 151896.

Research output: Contribution to journalArticle

Assessment of the Dose–Response Relationship Between Folate Exposure and Cognitive Impairment: Synthesizing Data from Documented Studies

Wang, B., Sahyoun, N. R., Shao, K., Dutta, E. & Clarke, J., Feb 1 2020, In : Risk Analysis. 40, 2, p. 276-293 18 p.

Research output: Contribution to journalArticle

Association between baseline abundance of Peptoniphilus, a Gram-positive anaerobic coccus, and wound healing outcomes of DFUs

Min, K. R., Galvis, A., Nole, K. L. B., Sinha, R., Clarke, J., Kirsner, R. S. & Ajdic, D., Jan 1 2020, In : PloS one. 15, 1, e0227006.

Research output: Contribution to journalArticle

Open Access

Association Between Sulfur-Metabolizing Bacterial Communities in Stool and Risk of Distal Colorectal Cancer in Men

Nguyen, L. H., Ma, W., Wang, D. D., Cao, Y., Mallick, H., Gerbaba, T. K., Lloyd-Price, J., Abu-Ali, G., Hall, A. B., Sikavi, D., Drew, D. A., Mehta, R. S., Arze, C., Joshi, A. D., Yan, Y., Branck, T., DuLong, C., Ivey, K. L., Ogino, S., Rimm, E. B. & 5 others, Song, M., Garrett, W. S., Izard, J., Huttenhower, C. & Chan, A. T., Apr 2020, In : Gastroenterology. 158, 5, p. 1313-1325 13 p.

Research output: Contribution to journalArticle

Open Access

Author Correction: Characterization of a recurrent missense mutation in the forkhead DNA-binding domain of FOXP1 (Scientific Reports, (2018), 8, 1, (16161), 10.1038/s41598-018-34437-0)

Johnson, T. B., Mechels, K., Anderson, R. H., Cain, J. T., Sturdevant, D. A., Braddock, S., Pinz, H., Wilson, M. A., Landsverk, M., Roux, K. J. & Weimer, J. M., Dec 1 2020, In : Scientific reports. 10, 1, 6635.

Research output: Contribution to journalComment/debate

Open Access

Chinese sweet tea (Rubus suavissimus) polyphefnols attenuate the allergic responses in a Balb/c mouse model of egg allergy

Mine, Y., Majumder, K., Jin, Y. & Zeng, Y., Apr 2020, In : Journal of Functional Foods. 67, 103827.

Research output: Contribution to journalArticle

Open Access

Continuous chromosome-scale haplotypes assembled from a single interspecies F1 hybrid of yak and cattle

Rice, E. S., Koren, S., Rhie, A., Heaton, M. P., Kalbfleisch, T. S., Hardy, T., Hackett, P. H., Bickhart, D. M., Rosen, B. D., Ley, B. V., Maurer, N. W., Green, R. E., Phillippy, A. M., Petersen, J. L. & Smith, T. P. L., Apr 6 2020, In : GigaScience. 9, 4, giaa029.

Research output: Contribution to journalArticle

Open Access

Covalent Modification of the Flavin in Proline Dehydrogenase by Thiazolidine-2-Carboxylate

Campbell, A. C., Becker, D. F., Gates, K. S. & Tanner, J. J., Apr 17 2020, In : ACS chemical biology. 15, 4, p. 936-944 9 p.

Research output: Contribution to journalArticle

Deletion of fatty acid transport protein 2 (FATP2) in the mouse liver changes the metabolic landscape by increasing the expression of PPARα-regulated genes

Perez, V. M., Gabell, J., Behrens, M., Wase, N., DiRusso, C. C. & Black, P. N., Apr 24 2020, In : Journal of Biological Chemistry. 295, 17, p. 5737-5750 14 p.

Research output: Contribution to journalArticle

Open Access

Determinations of the peroxidative susceptibilities of cod liver oils by a newly-developed 1H NMR-based method: Resistance of an antioxidant-fortified product isolated from pre-fermented sources

Percival, B. C., Zbasnik, R., Schlegel, V., Edgar, M., Zhang, J. & Grootveld, M., Feb 12 2020, In : BMC Research Notes. 13, 1, 73.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Development of Prolamin-Based Composite Nanoparticles for Controlled Release of Sulforaphane

Wang, L., Rose, D., Rao, P. & Zhang, Y., Jan 1 2020, (Accepted/In press) In : Journal of Agricultural and Food Chemistry.

Research output: Contribution to journalArticle

2 Scopus citations

Divergent phenotypic response of rice accessions to transient heat stress during early seed development

Paul, P., Dhatt, B. K., Sandhu, J., Hussain, W., Irvin, L., Morota, G., Staswick, P. & Walia, H., Jan 1 2020, In : Plant Direct. 4, 1, e00196.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Editorial: Special Issue on mitochondrial fidelity

Khalimonchuk, O., Mar 2020, In : Mitochondrion. 51, 1 p.

Research output: Contribution to journalEditorial

Effect of dietary medium-chain fatty acids on nursery pig growth performance, fecal microbial composition, and mitigation properties against porcine epidemic diarrhea virus following storage

Gebhardt, J. T., Thomson, K. A., Woodworth, J. C., Dritz, S. S., Tokach, M. D., Derouchey, J. M., Goodband, R. D., Jones, C. K., Cochrane, R. A., Niederwerder, M. C., Fernando, S., Abbas, W. & Burkey, T. E., Jan 2 2020, In : Journal of animal science. 98, 1, skz358.

Research output: Contribution to journalArticle

1 Scopus citations

Evaluation of N-terminal labeling mass spectrometry for characterization of partially hydrolyzed gluten proteins

Cao, W., Baumert, J. L. & Downs, M. L., Jan 6 2020, In : Journal of Proteomics. 210, 103538.

Research output: Contribution to journalArticle

Fermented foods in a global age: East meets West

Tamang, J. P., Cotter, P. D., Endo, A., Han, N. S., Kort, R., Liu, S. Q., Mayo, B., Westerik, N. & Hutkins, R., Jan 1 2020, In : Comprehensive Reviews in Food Science and Food Safety. 19, 1, p. 184-217 34 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Functionally annotating regulatory elements in the equine genome using histone mark chip-seq

Kingsley, N. B., Kern, C., Creppe, C., Hales, E. N., Zhou, H., Kalbfleisch, T. S., Macleod, J. N., Petersen, J. L., Finno, C. J. & Bellone, R. R., Jan 2020, In : Genes. 11, 1, 3.

Research output: Contribution to journalArticle

Open Access

Genome sequences of uncommon Shiga toxin-producing escherichia coli serotypes

Abdalhamid, B., McCutchen, E. L., Iwen, P. C., Gomes-Neto, J. C., Benson, A. K. & Hinrichs, S. H., Mar 5 2020, In : Microbiology Resource Announcements. 9, 10, e01496-19.

Research output: Contribution to journalArticle

Open Access

Healthy pregnancies and essential fats: Focus group discussions with Zambian women on dietary need and acceptability of a novel RUSF containing fish oil DHA

Chunda-Liyoka, C., Lubeya, M. K., Imakando, M., Kisling, S., Majid, S., Willis, M. S., Wood, C., Kankasa, C. & Dirusso, C. C., Feb 10 2020, In : BMC Pregnancy and Childbirth. 20, 1, 93.

Research output: Contribution to journalArticle

Open Access

HIV-1 subtypes and drug resistance mutations among female sex workers varied in different cities and regions of the Democratic Republic of Congo

Kwon, E. H., Musema, G. M. A., Boelter, J., Townsend, S., Tshala-Katumbay, D., Kayembe, P. K., West, J. & Wood, C., Jan 1 2020, In : PloS one. 15, 2, e0228670.

Research output: Contribution to journalArticle

Open Access

How the Cervical Microbiota Contributes to Cervical Cancer Risk in Sub-Saharan Africa

Klein, C., Kahesa, C., Mwaiselage, J., West, J. T., Wood, C. & Angeletti, P. C., Feb 12 2020, In : Frontiers in Cellular and Infection Microbiology. 10, 23.

Research output: Contribution to journalReview article

Open Access

Identification of immunogenic epitopes that permit the detection of antigen-specific T cell responses in multiple serotypes of group B coxsackievirus infections

Lasrado, N., Gangaplara, A., Arumugam, R., Massilamany, C., Pokal, S., Zhou, Y., Xiang, S. H., Steffen, D. & Reddy, J., Jan 1 2020, In : Viruses. 12, 3, 347.

Research output: Contribution to journalArticle

Open Access

Intimate attachment of escherichia coli o157:H7 to urinary bladder epithelium in the gnotobiotic piglet model

Moxley, R. A., Bargar, T. W., Kachman, S. D., Baker, D. R. & Francis, D. H., Feb 2020, In : Microorganisms. 8, 2, 263.

Research output: Contribution to journalArticle

Open Access

In vitro digestibility of proteins from historical and modern wheat cultivars

Gulati, P., Brahma, S., Graybosch, R. A., Chen, Y. & Rose, D. J., Apr 1 2020, In : Journal of the Science of Food and Agriculture. 100, 6, p. 2579-2584 6 p.

Research output: Contribution to journalArticle

Kinesin Kif2C in regulation of DNA double strand break dynamics and repair

Zhu, S., Paydar, M., Wang, F., Li, Y., Wang, L., Barrette, B., Bessho, T., Kwok, B. H. & Peng, A., Jan 2020, In : eLife. 9, e53402.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Long noncoding RNA SNHG12 integrates a DNA-PK–mediated DNA damage response and vascular senescence

Haemmig, S., Yang, D., Sun, X., Das, D., Ghaffari, S., Molinaro, R., Chen, L., Deng, Y., Freeman, D., Moullan, N., Tesmenitsky, Y., Wara, A. K. M. K., Simion, V., Shvartz, E., Lee, J. F., Yang, T., Sukova, G., Marto, J. A., Stone, P. H., Lee, W. L. & 3 others, Auwerx, J., Libby, P. & Feinberg, M. W., Feb 19 2020, In : Science translational medicine. 12, 532, eaaw1868.

Research output: Contribution to journalArticle

Lubrication characteristics of wax esters from oils produced by a genetically-enhanced oilseed crop

Shirani, A., Joy, T., Lager, I., Yilmaz, J. L., Wang, H. L., Jeppson, S., Cahoon, E. B., Chapman, K., Stymne, S. & Berman, D., Jun 2020, In : Tribology International. 146, 106234.

Research output: Contribution to journalArticle

Manipulation of the molecular spin crossover transition of Fe(H2B(pz)2)2(bipy) by addition of polar molecules

Costa, P. S., Hao, G., N'Diaye, A. T., Routaboul, L., Braunstein, P., Zhang, X., Zhang, J., Ekanayaka, T. K., Shi, Q. Y., Schlegel, V., Doudin, B., Enders, A. & Dowben, P. A., Jan 1 2020, In : Journal of Physics Condensed Matter. 32, 3, 034001.

Research output: Contribution to journalArticle

Mass spectrometry confirmation that clinically important peanut protein allergens are present in household dust

Brough, H. A., Mills, E. N. C., Richards, K., Lack, G. & Johnson, P. E., Mar 1 2020, In : Allergy: European Journal of Allergy and Clinical Immunology. 75, 3, p. 709-712 4 p.

Research output: Contribution to journalLetter

Metabolic engineering of soybean seeds for enhanced vitamin E tocochromanol content and effects on oil antioxidant properties in polyunsaturated fatty acid-rich germplasm

Konda, A. R., Nazarenus, T. J., Nguyen, H., Yang, J., Gelli, M., Swenson, S., Shipp, J. M., Schmidt, M. A., Cahoon, R. E., Ciftci, O. N., Zhang, C., Clemente, T. E. & Cahoon, E. B., Jan 2020, In : Metabolic Engineering. 57, p. 63-73 11 p.

Research output: Contribution to journalArticle

Metalloproteomic approach of mercury-binding proteins in liver and kidney tissues of Plagioscion squamosissimus (corvina) and Colossoma macropomum (tambaqui) from Amazon region: Possible identification of mercury contamination biomarkers

Bittarello, A. C., Vieira, J. C. S., Braga, C. P., da Cunha Bataglioli, I., de Oliveira, G., Rocha, L. C., Zara, L. F., Buzalaf, M. A. R., de Oliveira, L. C. S., Adamec, J. & de Magalhães Padilha, P., Apr 1 2020, In : Science of the Total Environment. 711, 134547.

Research output: Contribution to journalArticle

1 Scopus citations

Multi-trait random regression models increase genomic prediction accuracy for a temporal physiological trait derived from high-throughput phenotyping

Baba, T., Momen, M., Campbell, M. T., Walia, H. & Morota, G., Jan 1 2020, In : PloS one. 15, 2, e0228118.

Research output: Contribution to journalArticle

Open Access

Mycoplasma co-infection is associated with cervical cancer risk

Klein, C., Samwel, K., Kahesa, C., Mwaiselage, J., West, J. T., Wood, C. & Angeletti, P. C., May 2020, In : Cancers. 12, 5, 1093.

Research output: Contribution to journalArticle

Open Access

Nanoformulated SOD1 ameliorates the combined NASH and alcoholassociated liver disease partly via regulating CYP2E1 expression in adipose tissue and liver

Gopal, T., Kumar, N., Perriotte-Olson, C., Casey, C. A., Donohue, T. M., Harris, E. N., Talmon, G., Kabanov, A. V. & Saraswathi, V., Jan 1 2020, In : American Journal of Physiology - Gastrointestinal and Liver Physiology. 318, 3, p. G428-G438

Research output: Contribution to journalArticle

Nutritional factors modulating plant and fruit susceptibility to pathogens: BARD workshop, Haifa, Israel, February 25–26, 2018

Prusky, D., de Assis, L. J., Baroncelli, R., Benito, E. P., del Castillo, V. C., Chaya, T., Covo, S., Díaz-Mínguez, J. M., Donofrio, N. M., Espeso, E., Fernandes, T. R., Goldman, G. H., Judelson, H., Nordzieke, D., Di Pietro, A., Sionov, E., Sukno, S. A., Thon, M. R., Todd, R. B., Voll, L. & 3 others, Xu, J. R., Horwitz, B. A. & Wilson, R. A., Jan 1 2020, (Accepted/In press) In : Phytoparasitica.

Research output: Contribution to journalReview article

Open Access

Oil crops for the future

Ortiz, R., Geleta, M., Gustafsson, C., Lager, I., Hofvander, P., Löfstedt, C., Cahoon, E. B., Minina, E., Bozhkov, P. & Stymne, S., Jan 1 2020, (Accepted/In press) In : Current Opinion in Plant Biology.

Research output: Contribution to journalReview article

Oral intervention of Lactobacillus pentosus S-PT84 attenuates the allergenic responses in a BALB/C mouse model of egg allergy

Majumder, K., Jin, Y., Shibata, H. & Mine, Y., Apr 2020, In : Molecular Immunology. 120, p. 43-51 9 p.

Research output: Contribution to journalArticle

Palmitvaccenic Acid (Δ11- cis-hexadecenoic acid) Is Synthesized by an OLE1-like Desaturase in the Arbuscular Mycorrhiza Fungus Rhizophagus irregularis

Brands, M., Cahoon, E. B. & Dörmann, P., Mar 24 2020, In : Biochemistry. 59, 11, p. 1163-1172 10 p.

Research output: Contribution to journalArticle

Prebiotic-Induced Anti-tumor Immunity Attenuates Tumor Growth

Li, Y., Elmén, L., Segota, I., Xian, Y., Tinoco, R., Feng, Y., Fujita, Y., Segura Muñoz, R. R., Schmaltz, R., Bradley, L. M., Ramer-Tait, A., Zarecki, R., Long, T., Peterson, S. N. & Ronai, Z. A., Feb 11 2020, In : Cell Reports. 30, 6, p. 1753-1766.e6

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Prevalence of Kaposi's sarcoma-associated herpesvirus and transfusion-transmissible infections in Tanzanian blood donors

Lidenge, S. J., Tran, T., Tso, F. Y., Ngowi, J. R., Shea, D. M., Mwaiselage, J., Wood, C. & West, J. T., Jun 2020, In : International Journal of Infectious Diseases. 95, p. 204-209 6 p.

Research output: Contribution to journalArticle

Open Access

Proline metabolic dynamics and implications in drought tolerance of peanut plants

Furlan, A. L., Bianucci, E., Giordano, W., Castro, S. & Becker, D. F., Jun 2020, In : Plant Physiology and Biochemistry. 151, p. 566-578 13 p.

Research output: Contribution to journalArticle

Quantitative assessment of microbial quality and safety risk: A preliminary case study of strengthening raspberry supply system in Chile

Ortúzar, J. E., Dogan, O. B., Sotomayor, G., Jiménez, C., Clarke, J., Flores, R. A., Gray, G. M., Rupnow, J. H. & Wang, B., Jul 2020, In : Food Control. 113, 107166.

Research output: Contribution to journalArticle

Redox homeostasis, oxidative stress and mitophagy

Garza-Lombó, C., Pappa, A., Panayiotidis, M. I. & Franco, R., Mar 2020, In : Mitochondrion. 51, p. 105-117 13 p.

Research output: Contribution to journalReview article

Reduction in pathogenic load of wheat by tempering with saline organic acid solutions at different seasonal temperatures

Sabillón, L., Stratton, J., Rose, D. & Bianchini, A., Jan 16 2020, In : International Journal of Food Microbiology. 313, 108381.

Research output: Contribution to journalArticle

Rilpivirine-associated aggregation-induced emission enables cell-based nanoparticle tracking

Mukadam, I. Z., Machhi, J., Herskovitz, J., Hasan, M., Oleynikov, M. D., Blomberg, W. R., Svechkarev, D., Mohs, A. M., Zhou, Y., Dash, P., McMillan, J. E., Gorantla, S., Garrison, J., Gendelman, H. E. & Kevadiya, B. D., Feb 2020, In : Biomaterials. 231, 119669.

Research output: Contribution to journalArticle

Risk Reduction in Peanut Immunotherapy

Remington, B. C. & Baumert, J. L., Feb 2020, In : Immunology and Allergy Clinics of North America. 40, 1, p. 187-200 14 p.

Research output: Contribution to journalReview article

1 Scopus citations

Sex Differences in the Reward-Enhancing Effects of Nicotine on Ethanol Reinforcement: A Reinforcer Demand Analysis

Barrett, S. T., Thompson, B. M., Emory, J. R., Larsen, C. E., Pittenger, S. T., Harris, E. N. & Bevins, R. A., Feb 6 2020, In : Nicotine and Tobacco Research. 22, 2, p. 238-247 10 p.

Research output: Contribution to journalArticle

1 Scopus citations